Coffea arabica (coffee): 113725573
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Entry
113725573 CDS
T11342
Name
(RefSeq) cysteine desulfurase 1, chloroplastic-like
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00450
Selenocompound metabolism
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
113725573
Enzymes [BR:
carb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
113725573
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
113725573
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
WHD_MCM_arc
Motif
Other DBs
NCBI-GeneID:
113725573
NCBI-ProteinID:
XP_027104619
UniProt:
A0A6P6VNN5
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Position
2c:7464910..7469908
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AA seq
487 aa
AA seq
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MMASTTMESAFLKIPSFGFVNPNIATSKLVSRSSVSLRFGFHFRSCAISSASAAEPASAS
SPSSVVNDSEKLGPGSLGHITRPDFPILHQAVNGSKLVYLDNAATSQKPTAVLEAIQNYY
ESYNSNVHRGIHYLSARATDEYELARQKVANFINASESREIVFTRNATEAINLVAYSWGL
TNLRPEDEIVLTIAEHHSNIVPWQLVAQKTGANLKFLELTEDEVPDVGKLKEMLSKKTKL
VAVHHVSNMLASVLPVDEIASWAHDVGAKVLVDACQSVPHMVVDVKKLGLDFLVASSHKM
CGPTGIGLLYGKSDLLNAMPPFLGGGEMIADVFLDHSTYAEPPSRFEAGTPAIAEAIGLG
ATIDYLSGIGMERIHDYEVELANYLYNSLRSVPNIRIYGPDPSRVFKRAALCSFNVEDVH
PTDVATFLDQRHGVAVRSGHHCAQPLHRYLGINASARASLHFYNTKEDVDDFIRALTDTI
SFFTSFK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcgacgactatggagagtgcgttcctcaaaattccatctttcggattcgta
aaccctaatattgctactagtaaacttgtcagtcggagctccgtttcactccgcttcggg
ttccactttcgttcctgcgccatatcctctgcttcagcagcagaacctgcttccgcttcg
tctccttcttcagtggtcaacgacagcgaaaaacttggacccggttctctcgggcacatc
acccgaccggacttccctattctccaccaggcagtgaatggctcaaaacttgtgtatttg
gacaatgcggcgacttcgcagaagccaactgctgttttggaagctatacagaattattac
gagtcttacaattctaatgtccaccgtggcattcattacttgagtgcaagggcaacggac
gagtatgaactagccagacagaaggttgcaaattttatcaatgcttcagaatccagggag
attgttttcacacggaatgcaactgaagctatcaacctcgtggcgtactcttggggacta
actaacttaaggccagaagacgagattgtgctgacaattgctgaacatcacagcaacatt
gtcccctggcaacttgtagctcaaaagactggtgcaaatctcaaatttttggaactcacg
gaggatgaagttcctgatgtaggaaagttgaaggaaatgctatctaagaaaacaaaactg
gttgccgtccatcatgtgtcaaatatgctagcttctgttctcccagttgatgaaatagcc
agttgggcacatgatgttggtgcaaaggtgcttgtagatgcttgccaaagtgttccacac
atggtcgttgatgtgaagaaacttggtcttgattttcttgtggcttcttctcacaagatg
tgtggccctacaggcattggactcttatatggtaagagtgacctcttgaatgccatgccg
cctttcttaggtggtggtgaaatgatagctgacgtctttttggatcattcgacgtatgct
gaaccaccgtcaagatttgaggctggtacacctgccattgctgaagcaataggattagga
gcaacaattgattatctctctggaattggcatggaacggatacatgattatgaggtagag
ctggccaactacctatacaatagtcttcgttcggtacccaatattcggatttatggccct
gatccttcacgagtatttaaaagagcagctctctgctctttcaacgttgaagatgttcac
cctacagatgttgctacctttcttgaccaacggcacggcgtagctgtaaggtccggccac
cactgtgctcagcccctccatcgttatctggggataaatgcaagtgcacgagctagcctt
cacttctacaataccaaggaggatgtggatgatttcatccgtgctcttactgatacaatc
agtttcttcacctctttcaaatga
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