KEGG   Coffea arabica (coffee): 113725577
Entry
113725577         CDS       T11342                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X3
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:carb01009]
    113725577
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:carb03036]
    113725577
Enzymes [BR:carb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     113725577
Protein phosphatases and associated proteins [BR:carb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113725577
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113725577
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel Acyltransf_2
Other DBs
NCBI-GeneID: 113725577
NCBI-ProteinID: XP_027104626
UniProt: A0A6P6VNP5
LinkDB
Position
2c:7504685..7514105
AA seq 1269 aa
MVMGTELVRTCIKEENMDIPSIPPGFESIAPFTLKKVEDKDIKVDHSPSASGSESQSTRM
EIEIEYSKEGKIAKTLRRRPWINYCHLDNSSGDESDSEQVLKLLKSRLPKGVIRGCDECV
NCQKVTAKWRPEEACRPDLKEVPVFYPSEEEFEDTLKYIASIRSKAEAYGICRIVPPPSW
KPPCPLKQKHQWENSKFSTRIQRIDKLQNRDSTLKVLKVNHQKRKKRRRCTKAGVDHGNG
SGDTKIPGDFGMYEAERFGFEPGPEITLHAFEEYADDFKTQYFSKSDTTSDPGGKMNMTL
DQREPSVADIEGEYWRMVERPTEEIEVLYGADLETGEFGSGFPKNSDQVGSSSDAKYVTS
GWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPK
LWYGVPGADALKLEAAMRKHLPDLFAEQPDLLHKLVTQLSPSILKAEGVPVYRCIQNPGE
FVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGQNAIELYREQGRKTSISHDKLLLGAA
REAVKAHWELSLLRKNTSANLRWRDVCGKDGILSKALKSRVETERVRREFLCSSSQALKM
ESSFDATSERECSVCFFDLHLSAAGCHYCSPDKYACLNHAKQLCSCSWGAKFFLFRYDIN
ELNMLVEALEGKLSSIYRWARLDLGLALTSMTRENSQAPGLVGKVSCTPEGAAPKGPNLQ
PDATSLNDQKAKGNAGIVNTTKAICPQTLQPEITSLNDQKVKGNAGILNTTKAICQPTLV
QKEKLTGELLASDKLKTFSILDNSLQNVVDAKPRQQFKRVPSPDAEACSRGKPSSTGNSF
SRPEVKNGSLKGNDDIILLSDDEGEELSMKLSEKAVGVPKEKVSCSSKNMTSTNRTANVP
LMSPKLSTSVCVKAEDLTLGERNLEPNLQDHIPHSISLTNTGADKNTEGFSGQIENRQCN
LPSASINSLPPQPCDGEKANNEDRLIKLEVDGNSRPTDNLQNLSSNASGSQNNLDRYYRQ
KGPRIAKVVRRINCNVEPLEFGKVSPGKLWCDSRAVYPKGFTSRVRYINLLDPTNMCYYV
SEILDAGKEGPLFMVSLEDSPSEVFVHVSAARCWELVRERVNQEIAKQHKLGKLKLPPLQ
PPGSLDGMEMFGFSSPAIVQVIQAMDQNRVCTEYWKSRPLMQIPQHAKPPGDTVGNLSLK
TEVSNHQEANQRQSVPVAVDTKITSLFKKAALEELQALYSILSNNNNPVSGQNLATRLLT
EEVHRRQDN
NT seq 3810 nt   +upstreamnt  +downstreamnt
atggtgatgggaacagaacttgtaagaacttgtattaaagaagaaaacatggatattcca
tccattccacctgggtttgagtcaattgctccattcactctgaagaaggtggaagataaa
gatataaaagtggatcattcaccatctgctagtggttctgaatcacagtcaacccgcatg
gaaattgaaattgaatacagcaaggaaggtaaaattgcaaagaccctcaggcgcagacct
tggataaattactgccatctggataacagttcaggggatgaatctgactctgagcaggtt
ttgaagcttttaaagtcccggcttccaaaaggggtaattcgtggatgtgatgagtgtgtc
aactgccaaaaggtaactgctaaatggcgtcctgaagaagcatgcaggcctgatcttaag
gaggttccagtcttctatccatctgaagaggagttcgaagacactttgaaatatatagca
agcatacgttctaaagcagaagcatatgggatttgccgcattgtgccacccccctcatgg
aaacctccctgtcctctcaagcaaaagcatcaatgggagaattcaaagttttcaactcgt
attcagcggattgacaaacttcaaaatcgggattcaacattaaaggtgttaaaagttaat
catcagaagaggaagaaaaggagaagatgcactaaagctggagtagaccatggaaatggt
agtggagacactaagatccctggtgattttggaatgtatgaggctgagagatttgggttt
gaacctggtccagagattactctgcatgcgtttgaggagtatgctgatgatttcaagacg
caatatttcagcaaaagtgatactacttcggacccaggaggaaagatgaacatgaccctt
gaccagcgggaaccctcagtggcggatattgagggtgaatattggcggatggtagagaga
cctacagaagaaattgaggtgctttatggggctgacttggaaactggagaatttggcagc
gggtttccaaaaaactctgatcaagttggctcttcttctgatgcaaagtatgtgacttct
ggatggaatttgaataacttccctaggctctcaggttctgttctctcatatgagagcagt
gacatatcaggtgtcctcgtgccttggctctacgtaggaatgtgtttctcatcattctgt
tggcacgttgaagatcaccacttgtactcgttaaattacatgcactggggagctccaaaa
ttgtggtatggtgttccaggagcagatgctctgaaactggaggcagctatgaggaagcat
ttgcctgacctttttgcagaacagcctgacttgctccataaattggtaactcaactttct
ccttccatactgaaagcagagggagtgcctgtctatcgatgcatccaaaatcctggagag
tttgttttaactttccctcgagcgtaccatgcagggttcaattgtggctttaattgtgcc
gaagcagtaaatgtagctcctgttgactggttacctcatggccagaatgctattgaactt
taccgtgagcagggccggaagacatcgatatcccatgataaattattgttaggggctgca
agggaagcagtaaaggcacattgggaacttagtttattaaggaagaacacttcagccaat
ttaagatggcgggatgtgtgtggtaaggatgggatcttatctaaagcattgaagtcacga
gtggagacggagagggttagaagggaatttctttgcagttcttcacaggcactaaagatg
gagagcagttttgatgctaccagtgagagagagtgcagtgtatgcttttttgatctgcat
ctgtctgctgcaggttgtcactactgttcaccagataaatacgcatgcttaaaccatgca
aaacagctgtgttcatgttcctggggcgcgaaatttttcctcttccgttatgacattaat
gaattgaatatgttggttgaagctttggaaggaaagttaagctcaatataccgatgggca
agacttgatctaggactagccctgacttctatgactagggagaattcacaagcacctggg
cttgttggtaaggtatcctgtacccctgaaggagctgcacccaaaggaccaaatttgcaa
ccagacgcaacttctttaaatgatcagaaagcaaagggaaatgcagggattgtgaatacc
acaaaggccatttgcccgcaaactttgcagccagagataacttctttaaatgatcagaaa
gtaaagggaaatgcggggattttgaataccacaaaggctatttgccagccaactttggtg
caaaaagagaagctaactggagagttattagcttcagataagttgaaaactttctccatc
ttagacaactctttacaaaacgttgttgatgcaaaacctaggcagcagttcaaaagggtg
ccttctcctgatgctgaagcttgttccagaggaaagccatcgagcacaggaaattcattt
tctagacctgaagtgaagaatggttcacttaaagggaatgatgatattatactccttagt
gatgatgaaggagaggagctgagcatgaaactgtctgaaaaagcagtgggcgttcccaaa
gaaaaggttagttgttctagtaagaatatgacatcaacaaataggacggccaatgtacct
ttgatgagtccaaaattgtccacctcagtgtgtgtaaaagctgaagatcttacactgggt
gagagaaatcttgagccgaatctgcaagatcatattccccacagtatttccttaaccaat
acaggtgctgataaaaatacagagggcttttcaggtcaaatagagaaccgtcaatgtaac
ttgccaagtgcgagtattaactctcttcctccacagccatgtgatggtgagaaggctaat
aatgaagataggctcataaagttggaagtagatggcaactcaaggccaacagataattta
caaaacctttcatctaatgcatctggatctcagaataatttggatagatattatcggcaa
aaaggtcctcgaattgctaaggtagttagacgaatcaattgtaatgttgaacctttggag
tttggaaaagtgagtcctggaaagttgtggtgtgatagtcgggctgtctaccccaaagga
ttcacgagtcgtgtgagatatataaatcttttggatccaacaaacatgtgctactatgtc
tctgaaattctggatgctggaaaggaaggacccttgttcatggtctcattggaagattct
ccaagtgaagtatttgtccatgtttcggctgctagatgctgggaattggttcgtgagaga
gtgaatcaagagattgccaagcagcataagttaggaaaattgaagctccctcctttgcag
cctcctggaagtcttgatggcatggaaatgtttggtttctcttcgccagcaattgtgcag
gttattcaggcgatggaccagaatagggtgtgtacagagtattggaagtcaaggcctctg
atgcagattccacaacacgctaaacctcctggggacactgtgggaaacttgtctttgaag
acagaagtgtcaaatcatcaagaggccaaccaaaggcagtcggttcccgttgctgttgat
acaaaaattaccagcctatttaaaaaggctgctcttgaagagctccaagctctgtacagt
attttgagcaacaataataatccggtcagtggccaaaacttagcaactcggcttcttact
gaagaggttcataggcgccaagataattag

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