Coffea arabica (coffee): 113725780
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Entry
113725780 CDS
T11342
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
carb Coffea arabica (coffee)
Pathway
carb04142
Lysosome biogenesis
carb04145
Phagocytosis
carb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113725780
04142 Lysosome biogenesis
113725780
04148 Efferocytosis
113725780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113725780
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113725780
Hops complex
113725780
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2067
CBARP
Motif
Other DBs
NCBI-GeneID:
113725780
NCBI-ProteinID:
XP_027104943
UniProt:
A0A6P6VPJ9
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Position
2c:9272776..9282185
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AA seq
595 aa
AA seq
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MAQIPNLDNAPINLTSIRDQSQKELLTILKNIRGKKCLAIDPKLGGSLSLIVQSSLLKEH
GAELRHLTAEPIQTDCTKVVYLVHSQLDLMKLISSQIRDDTSKGLQREYFVYFVPRRTVV
CEKILEEEKVYDLLTIGEYPLYLMPIDEDVISFELDLAYKDHLVDGDTTSLWHIAKALHK
LESTFGVIPNIRAKGKASARVADILNRMQIEEPVNASDAGMPEINTLILLDREVDMITPL
CSQLTYEGLLDEFLGVNNGAVEVDSSIMGVQQEGKKMKVPLNSTDKLFKEIRDLNFEVVV
QVLRQKATSMKQDYTEMTTTNQTVSELKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFL
GRLDMEHTIVEAESYDICFEYIEEMIHKQEPLVNVLRLLILFSITNSGLPKRNFDYLRRE
LLHSYGFEHMATLNNLEKAGLFRKQETKGNWITIKRALQLVVEDTDTANPNDISYVFSGY
APLSIRLVQHAIRSGWRPLEDILKLLPGPHTETKRSGYVGGSYDNISSSVLNLAKVGDGR
RSLVLVVFVGGVTFAEIAALRFLSSQEGMAYDLIIGTTKIINGQTLIEPFVEKLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattcctaatttagacaatgctcccattaatctcacctcaattagagatcag
tctcagaaagaacttcttactatcctgaaaaatattcgaggaaagaaatgtttagctatc
gatcccaagcttggtggttcgctttcattgatcgtccagagctcacttctcaaggaacat
ggggctgaattgcgtcatcttactgcagaaccaattcaaactgattgcaccaaggtcgtt
taccttgtccacagccaacttgacttgatgaaattaatttcctcacaaattcgtgatgat
acttcaaagggtcttcaaagagagtattttgtttactttgttcctcgtcgtactgttgtg
tgtgagaaaatactagaggaggagaaagtttatgacttgttgactataggtgagtaccca
ttgtatctaatgccaatagatgaggatgtaatatcgtttgagctcgaccttgcgtataaa
gatcatttggtggatggagacacgacctctctctggcacattgcaaaggctctccacaaa
ctagagtctacttttggagtgataccaaatattagggccaaagggaaagcatctgcacgt
gttgcagacattttgaatcgcatgcaaattgaagaacctgttaatgcatcagatgctggc
atgccagaaatcaatactctgatcctcctagacagagaggtagacatgatcactcctttg
tgttctcagttaacatacgaggggctgctggatgagtttcttggtgtcaataatggtgcg
gtggaagtagactcatctattatgggtgttcagcaagaaggaaaaaaaatgaaggttccc
cttaattcaactgacaaactgttcaaagagatacgggacttaaacttcgaagttgttgtc
caggttctacgtcaaaaagcaacatccatgaaacaggactacacagagatgacaactact
aatcaaacagtatctgaattgaaggactttgtgaaaaagctgaactcattgcctgaaatt
actcggcacataaatcttgctcagcacttgtcaacttttacatcaaaaccttcatttctt
gggcgtcttgatatggaacatacaattgttgaggctgagagctatgacatatgcttcgag
tacattgaagagatgatccacaagcaggagcctctagttaatgttctgcgtctcctgatc
ttgttttcaataacaaattcaggactgcccaaaaggaattttgactatttgaggagagag
ttgcttcacagctatggttttgagcacatggcaactctgaataatttggaaaaagctggt
ttgttcaggaagcaggagacaaaaggcaactggattacgatcaaacgcgctttgcagctt
gtagttgaggatacagatactgctaatcccaatgatatctcctatgtcttctctgggtat
gcacctctcagtattcgccttgttcagcatgcaatccgatctggatggcgccctcttgaa
gatatactgaagttactgccaggaccacatacagaaaccaagagaagtggatatgttggc
ggttcatatgacaatatttccagttctgtgctcaacttagccaaagttggagatggaagg
cgctctttggtccttgttgttttcgttggaggggttacatttgcagaaatcgctgccctt
cgtttcctcagctctcaggagggaatggcatatgacttaattataggaaccacgaagatc
atcaatggtcaaacgttaattgaaccatttgttgagaaattgggataa
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