Coffea arabica (coffee): 113725991
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Entry
113725991 CDS
T11342
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113725991
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113725991
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113725991
Protein phosphatases and associated proteins [BR:
carb01009
]
HAD phosphatases
Fcp/Scp phosphatases
113725991
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113725991
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Dicer_dsRBD
Glyco_transf_92
DSRM_2
Motif
Other DBs
NCBI-GeneID:
113725991
NCBI-ProteinID:
XP_027105243
UniProt:
A0A6P6VQC8
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MAAAVVVNLIEGERVLGEVEVYSIDDQNGVVWDRDEIRISEYSQPSERCPPLAVLHTVTS
SSSDSGGLCFKLELKDKSQQNSPLSILHATCLRENKTAIMPLDEEDELHLVAMHSRQHEG
QFPCFWGFIVASRLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSE
VDQQRVSAMLAEIKRYQDDKNILKQYAENDQVVDNGKVVKSQPEVVLALSDNHQTIVRPL
LRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRNYLTARGRKRFEVYVCTMAERDYALE
MWRLLDPDSNLIDPKELLDRIVCVKSGLRKSLFNVFQHGNCHPKMALVIDDRLKVWDEKD
QPRVHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRISEVAYED
DIKEIPSPPDVSNYLISEDDPSASNGNKDSLGFDGMADVEVERRLKEAISASSTAPLAIP
NLDPKIVATVQYAVPSSISVLQPTMSGPVVPFPSQQLSQVTSVLKNPINQAILPPEASLQ
SSPAREEGEVPESELDPDTRRRLLILQHGQDSRERTSSEPQFPVRTPLQVSAPRAQGRGW
FPIDEEMSPRQLNRVVPPKDFPLRSEPMEIEKHRSSHSPFLHKAESAVPPDRAFLENQRM
LKETLPREDNLRLNQPVASFPSFSGEEASMVRSSSANRDLDLESGQIDPQAETPIGALHD
IAFKCGTKVEFKQALVSSSELQFCAEVWFAGEKIGEGLGRTRREAQRHAADSSLMNLADK
YISSLKPDSSSVPGEWRRFPNTSNNGFANDFSSWGYQQLPKEEPGSFSTASMPPRVLDSR
LEASKRPVGPIAALKELCSMEGLGLAFQTQPQLSANPGQKNEVYAQVEIDGQVLGKGIGI
NWDEAKSQAAEKALGTLKSMLGSYGHKRQGSPRPWQGMSSKRLKPEFSRVLQRMPSSARY
PKNASPVP
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggtggtgaatttgatagaaggggaaagagtactgggggaagtggaa
gtgtatagtattgatgatcagaacggtgtcgtgtgggacagggacgaaattcggatctct
gagtattctcagccaagtgaaaggtgtccgccactggcggtgctgcatactgttacttct
tcttcgtcagactcaggcgggctttgcttcaaactggagttgaaagacaagtctcaacag
aattcgccgctttccattttgcacgccacttgtctcagggaaaataagactgcaataatg
ccacttgatgaggaagatgaacttcatttggttgccatgcattctagacagcatgaagga
cagttcccttgcttttggggattcattgttgcatctcgactttacaattcttgccttgtc
atgctgaaccttagatgtcttggtattgtatttgatcttgatgaaacactcattgtggcc
aacacaatgcgctcttttgaggataggattgaagccttacagcggaagataaactccgag
gttgatcaacaacgtgtttctgctatgctggcagaaataaagcgttatcaggatgacaaa
aatatactgaagcaatatgcagaaaatgaccaggttgttgataacgggaaggttgtcaag
tctcagcccgaggttgttcttgctttgtcggacaatcaccagaccattgttcgcccactt
ttaaggcttcaggagaagaacattatccttactcgcattaatcctcaaatccgtgataca
agtgtacttgtaagattgaggcctgcatgggaagatctcagaaactacttaaccgcaaga
ggtcgaaagcgttttgaagtgtatgtttgcacaatggctgaaagggactatgctttagaa
atgtggcggctccttgatcctgattcaaacttgattgacccgaaagagctattggatcgt
attgtctgtgtcaagtctggcttgaggaagtcgttgttcaatgttttccaacatggaaac
tgtcatcctaagatggcattggtgattgatgaccggttaaaagtgtgggatgaaaaggat
caacctcgagtgcatgtggttcctgcctttgctccttattatgctcctcaagctgaagcc
aacaatgcaattccagttctctgtgttgcaaggaatgtagcgtgcaatgtcagaggtggt
ttcttcaaagaatttgatgagggtctcttgcaacgaatttctgaagttgcatacgaagat
gatattaaagaaattccttctcctcctgatgtgagcaactatttaatctcagaggatgat
ccttccgcttcaaatggaaacaaggattcacttggttttgatggcatggcagatgttgag
gtggaaagaagattaaaggaggcaatttcggcttcctccactgctcctttggcaattcca
aatttggatccaaaaattgttgccacagtccaatatgctgtaccttcttctatttctgtg
ctgcaaccaacgatgtcagggccagtggttccctttccatctcagcagttgtctcaagtg
acttctgtccttaaaaatcctattaatcaagctattcttcctccagaagcaagcttgcaa
agttctcctgctagggaagagggtgaagtcccagaatcagagttagatcctgatacaagg
aggagactactcattttgcagcatggtcaagactcaagggagcgcacatcaagtgaacct
cagtttcctgtacgcacaccattacaagtctctgcaccgagggctcagggacgtggttgg
tttccaattgatgaagagatgagtccaagacaacttaacagagttgtaccaccaaaggat
ttccctctgcgctcagaacctatggaaattgaaaaacaccgttccagtcactctcctttt
ctccacaaagcagagagtgctgtcccacctgatagagcttttcttgaaaaccagaggatg
ctgaaggagacacttcctagagaggataatttgagattaaaccagccagttgccagtttc
ccatcattttctggtgaagaagcttccatggttcgatcatcttcagcgaatagagatctt
gaccttgaatctggacaaattgatccgcaggctgaaacacctattggagctttgcatgat
attgcattcaaatgcggaacaaaggtggagttcaagcaagcattggtttcaagctcggag
ttgcaattctgtgcagaggtctggtttgcgggagagaaaattggtgaagggctaggtagg
accagaagggaagcacagcgtcatgctgctgacagttcacttatgaatttggctgataag
tatatatcatctctcaaacctgattccagctctgttcctggggaatggcgtagattccca
aatacatccaacaatggttttgccaacgattttagttcttgggggtatcaacaattgcct
aaggaggagcccgggtcattttctactgcatccatgcctcctagggtgctggattcgaga
ttggaggcgtccaagagacctgtgggtccaattgctgcccttaaagagctgtgttcaatg
gagggccttggcttagctttccaaactcagcctcagctttcagctaatcctggccaaaaa
aatgaagtgtatgcacaggttgaaatagatggacaggtgttaggaaagggaattgggata
aactgggatgaagcaaaatcacaggctgctgaaaaggcccttggaaccttgaaatcaatg
cttggttcatatggtcacaagcgtcagggctctcccagaccatggcaggggatgtcaagc
aaaagattgaaaccggagttttccagggttctgcagcggatgccatcttctgcaagatat
ccaaagaatgcttctcccgtaccgtaa
DBGET
integrated database retrieval system
