Coffea arabica (coffee): 113726021
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Entry
113726021 CDS
T11342
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 24
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113726021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113726021
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
113726021
Ubiquitin system [BR:
carb04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
113726021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
UEV
Motif
Other DBs
NCBI-GeneID:
113726021
NCBI-ProteinID:
XP_027105277
UniProt:
A0A6P6VRN5
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All DBs
Position
2c:complement(11796933..11805516)
Genome browser
AA seq
933 aa
AA seq
DB search
MDLRLTDFDSFSESSSSEDQDDVEFLYGGHASSILSSLEESIGKIDDFLSFERGFMHGDI
VCSAKDPSGQMGKVVDVDLTVDLENVHGSKIRDVNCKILKKIRSVSVGDYVVYGAWLGKV
QNIVDCITVLFDDGTKSEFSTMGPEKLVPISPDLLEDSLYPFYPGQRVQVESLPVSKPTR
WLCGMKKDNRNQGTVCSVDAGLVYVNWLGCEVVGQKISTPSSLQDLKNLTLLPCFTQANW
QLGDWCIPVIDCKALNENSFLSPPAKGLIDGKEKSEGISQRGNLVHHFQGIAVITKTKTK
VNVLWQDGSLSVGLDSNSLLPVSVVDAHDFWPEQFVLEKGICDDLPVPSVQRWGIVKCVD
AKERTVKVEWRTVSIDQATSVKLEQMEEIVSAYELVEHPDYSYAVGAVVIRLQKYHFVYQ
SSGKVSGNHLISKWGAVTGTETYPTYTDTCECLNGNSCHDFSCCFGIVVGFKGGDVQVKW
ANGATTMVAPYEIYQVDKFEGLSATVAPYNGHTEPSNEEMIVLGDQSLEYMEKDQSGFKA
DREEIENKLISSSSSSFPQAAIGLFTTITSTLFGSLGSSLFGAYRWLSKDEEKAVIFSEE
ELELCDIHPVSTPVDIGEIETTKETNSVQHTKEVEEEKDCVLPCNNKHPEFFRRFDMVND
CSDHHFVDGAGKGRQSSQMNRAWLKRVQKEWSILEKNLPETVFVRTYEERMDLLRAVLVG
APGTPYHDGLFFFDIFLPLEYPYQPPMVYYNSGGLRVNPNLYESGKICLSLLNTWTGSGS
EVWNPENSTILQVLLSLQALVLNEKPYFNEAGYDSQIGKSEGEKNSVSYNENAFLVNCKS
MLYLLRKPPKHFEALVVEHFSQHCKHILLACKAYMNGAPVGSAYGNEKIAQGIRIESSMG
FKIMLTKLFPRLVEAFSSKGMDCSDVLKQDSNH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcgcctcacagactttgacagtttcagtgaaagcagtagcagtgaggatcag
gatgatgttgaatttctttatggtggacatgcatcttctattctttcgagtcttgaggaa
tccattggcaaaattgatgatttcctctcatttgaaagaggattcatgcatggggatatt
gtctgttctgcaaaagatccatctgggcagatgggaaaagtggtagatgtggatctcact
gtggacttggagaatgttcatggaagcaaaattcgagatgtcaattgcaaaattttgaaa
aaaattcgatctgtatcagtaggcgactatgtggtgtacggtgcctggctgggaaaagtg
caaaacatagttgattgcataactgttctttttgatgatggaacaaagtctgaattctct
acaatgggtccagagaagcttgtacctatttctccagacttacttgaagattccctttat
cctttctatccaggacagagagtacaggtggaatctttacctgtctcgaaaccaaccagg
tggttatgtggtatgaaaaaggataatagaaatcaaggcactgtctgttcagtggatgct
ggacttgtgtatgtaaattggcttggttgtgaagtggtaggacaaaagatatctactccc
tcatctttgcaagatttaaaaaacttgaccttgttgccatgtttcactcaagcaaactgg
cagctaggtgattggtgtataccagtaattgactgcaaggctctgaatgaaaatagtttt
ttaagtccaccagctaaaggacttattgatggaaaagaaaaatcagaaggtatatctcaa
agaggcaacttggttcatcacttccagggaattgcagttatcacaaagacaaagacaaaa
gtcaatgtgctatggcaggatggtagcctttcagttggactagattcaaactctctgctt
cctgtgagtgtagttgatgcgcatgatttctggcctgagcaattcgtgctagaaaaggga
atctgcgatgatttgcctgttcccagtgtccaaagatggggcattgtgaaatgtgtagat
gctaaagaaagaactgtgaaggtggagtggagaactgtttccatagatcaagcaaccagc
gttaagctagagcagatggaggaaattgttagtgcatatgaattggttgaacacccagac
tactcatatgctgttggtgctgtagttattaggttgcagaagtatcattttgtttatcaa
tcttctggaaaagtttctggaaaccacttgatatcaaaatggggtgcagttacaggcact
gagacatatcctacatatactgatacatgtgaatgcctgaatggaaattcctgccatgat
ttctcgtgctgctttggcattgtagttggcttcaaaggtggggatgttcaagtgaaatgg
gctaatggtgctacaactatggttgcaccatatgagatctatcaagttgacaaatttgaa
ggtttatctgccacagttgcaccttacaatggacacactgagccatcaaatgaggagatg
attgtgcttggcgaccaatctttggaatatatggagaaggaccaatcaggtttcaaggct
gacagagaagagattgaaaataagttaatcagctctagttcctcttctttccctcaagca
gccattggacttttcactacgatcacctcaaccctctttggctccctgggtagttcacta
tttggagcatacagatggttatcaaaagacgaggaaaaggctgttatctttagtgaggag
gaacttgaactttgtgacatacatccggttagtacaccagtggatataggtgaaatagag
acaactaaggaaacaaattcagtgcagcacaccaaagaggttgaagaagaaaaggattgt
gtgcttccatgtaacaataagcatcctgaattcttcaggcgatttgatatggttaatgat
tgctctgaccaccattttgttgatggtgctggaaagggccggcaatcttcccagatgaat
cgagcttggctgaaaagagtccagaaagaatggagcattttagaaaaaaatcttccagaa
acggtctttgttcgtacatatgaggaaagaatggatcttctgcgagctgttcttgtaggg
gctcctggaacaccatatcacgatggattatttttctttgacatttttcttcccctggag
tatccttatcaaccacctatggtgtactacaattctggtggacttcgtgtcaatcctaat
ttatacgagtcaggcaaaatttgccttagtctcctcaatacatggacagggtctggaagt
gaagtttggaatcctgaaaattctacaattcttcaagttctcctgtccctccaagctctt
gtccttaatgaaaagccttatttcaatgaggctggatatgattcgcagattggaaaatct
gagggtgagaagaactcagtgagctacaatgaaaatgcattccttgttaactgcaagtcc
atgttatacctactacgcaagccacccaagcattttgaggcactggttgtggagcacttt
agtcaacattgcaaacatattctattggcttgtaaggcatatatgaatggagctccggta
ggttcagcttatggaaatgagaaaattgcacaaggaataagaattgaaagctctatgggg
ttcaagatcatgcttaccaagctcttccctagacttgttgaagcattctccagtaagggt
atggactgcagcgacgtattaaagcaggatagtaatcattga
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