Coffea arabica (coffee): 113726239
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Entry
113726239 CDS
T11342
Name
(RefSeq) probable ribonuclease P/MRP protein subunit POP5
KO
K03537
ribonuclease P/MRP protein subunit POP5 [EC:
3.1.26.5
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113726239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113726239
03016 Transfer RNA biogenesis [BR:
carb03016
]
113726239
03029 Mitochondrial biogenesis [BR:
carb03029
]
113726239
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113726239
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
113726239
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113726239
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
113726239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_Rpp14
Pop8
PSMD12-CSN4_N
SopD
Motif
Other DBs
NCBI-GeneID:
113726239
NCBI-ProteinID:
XP_027105643
UniProt:
A0A6P6VRJ3
LinkDB
All DBs
Position
2c:15048925..15051340
Genome browser
AA seq
154 aa
AA seq
DB search
MVGFKNRYLVMEVFLDPNKDLAADEPIIITQFNLSKAIKDSILMNFGECGLASSLNSFQV
KYVNPITKLCIIRASREDHQKVWAAITMVRSIGNCPVTFSLLAISGSINACKKAALKSDE
LKFEQYKLMAQVQTTDDILQQMQNCLAKIKVLEH
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctttaagaatagatacttggtgatggaggtgtttctggatccaaataaagac
cttgcagctgatgaacccattattattactcagtttaatttgtccaaagccatcaaagat
agcattcttatgaattttggcgaatgtggcttggcctcgtcgcttaattcatttcaagta
aaatacgtgaatcctattacaaagctctgtatcatcagagcctcaagggaggatcatcaa
aaagtttgggctgcaattaccatggttaggagtatagggaattgccctgtgactttcagc
ttacttgctataagcggaagtatcaacgcttgcaaaaaagctgctttgaagagtgacgaa
ttgaagtttgagcaatacaagttaatggcccaagtccaaacaacagatgacatccttcag
cagatgcagaactgtcttgcaaagatcaaagtgttggagcactaa
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