Coffea arabica (coffee): 113726497
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Entry
113726497 CDS
T11342
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
carb Coffea arabica (coffee)
Pathway
carb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113726497
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
BaffR-Tall_bind
Motif
Other DBs
NCBI-GeneID:
113726497
NCBI-ProteinID:
XP_027106047
UniProt:
A0A6P6VW07
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Position
2c:17842171..17844485
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AA seq
598 aa
AA seq
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MAVDSVLSSPLGPPACEKDAKALRFIEEMTRNADVVQEKVLAEILTRNGQTEYLQRFKLG
GFTDRLTFKSEIPVITYEDLQPEIQRIANGDRSHILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLCVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYAQMLCGLYEREQVLRVGAVFASGLLRAIRF
LNLNWKQLTHDIRTGSLNPRVTDPLVRECVARILRPDPELADFVANECAKESWERIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMSKPSEVSYTI
MPNMAYFEFLPHDPNSPGFTRDSPPKLVDLADVEIGKEYELVITTYAGLYRYRVGDILRV
TGFHNSAPQFRFVRRKNVLLSIDSDKTDEAELQKAVENASQLLREYNTSVVEYTSFADAK
TIPGHYVIYWELLVKDAAHSPSDEALNGCCLAMEESLNSVYRQGRVADNSIGPLEIRVVK
SGTFEELMDYAISRGASINQYKVPRCVSFTPIVELLDSRVVSVHFSPSLPRWTPERRR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggattcagtcttgtcttcgcccttgggtcctccagcgtgcgagaaagacgca
aaggcactccgattcatcgaggaaatgacccgaaatgccgacgtggttcaggagaaagtg
ttggccgaaatactgacgcgaaatggccaaactgagtaccttcagcgcttcaaacttggt
ggcttcaccgaccgcctcaccttcaagtccgaaatcccagttattacctatgaagatctt
cagccggagattcaacgtatcgctaatggtgaccgctctcatattttatcggctcacccc
atctctgaattcctcaccagctctgggacttcagctggcgaaagaaaactgatgcccacc
attaaggaagagttggatcgtcgtcagcttctttacagtcttctcatgcccgttatgaac
ctttgcgtgccgggattggacaaaggcaaaggtttatatttcttgtttgtcaagtctgaa
acaaagaccccaggcgggcttctggcgcggcccgtcctcaccagctactacaagagcgac
catttcaagacccgaccatatgacccctacaacgtttacacaagcccaaacgaggccatc
ctctgcccagactcattccagagcatgtacgcccaaatgctttgcggtctctacgagcgc
gaacaagttctccgtgttggcgccgtgtttgcctccggtctcctccgtgctatccggttc
cttaatctaaactggaaacagctcacccacgatatccgaaccgggtcgttaaaccccaga
gtaacggaccctttggttcgggaatgcgtggcacgaatccttagaccggaccccgagcta
gctgattttgttgccaacgaatgcgcaaaggaaagctgggaaagaattatcaccagaatc
tggccaaacacgaaatacctagacgtgatcgtaaccggtgcaatggctcagtacattccg
acgctggattattacagcggtggattaccaaaagcatgcaccatgtacgcctcctccgag
tgttattttgggctcaaccttaatcccatgtccaaaccctcggaagtctcgtataccatc
atgccaaacatggcctacttcgagttcctgccccacgatcccaactcgcccgggttcacg
cgcgactcgcctcccaaactcgttgacctggcggatgttgaaattggtaaagaatacgag
ctagtaatcactacatatgctggattgtacaggtaccgcgtgggcgacattctccgtgtc
accggatttcataattcagcgcctcagttccgctttgtgaggagaaaaaatgttttgctg
agcatcgactcggacaagacagacgaggccgagttacaaaaggcggttgaaaatgcttcg
cagctgttgcgcgaatataatactagcgtggtggagtacacgagttttgcagacgcgaag
acgattccgggtcactacgtgatttattgggagttactggtcaaggacgcggcccactcg
cccagtgatgaggcgttgaacgggtgctgtttagccatggaagagtcactcaactcagtc
taccgacagggtcgagtcgctgacaactcaattggcccgctggagatccgtgtggtaaaa
agcgggacttttgaagagttgatggattatgctatttctaggggtgcttcaattaatcag
tacaaggtgcctaggtgcgtcagctttaccccaattgtggaacttcttgactccagagtc
gtctcggtacattttagcccatcattgccccgttggactcccgaacgacgccggtaa
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