Coffea arabica (coffee): 113726690
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Entry
113726690 CDS
T11342
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113726690
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113726690
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113726690
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GFIT
Motif
Pfam:
PRORP
PPR_long
PPR_2
TPR_24
PPR
RNase_Zc3h12a
PPR_3
PPR_1
Motif
Other DBs
NCBI-GeneID:
113726690
NCBI-ProteinID:
XP_071931139
UniProt:
A0ABM4WH77
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Position
2c:complement(19949753..19959645)
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AA seq
574 aa
AA seq
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MTHRMALIKTSPLFHLFCKTPSALSSYTGPNCFKSLKPITIHAKFQPQSTFSMTKTTNLC
TASAILQGPSSSSSAIPHKSRKKARSESLLRHKLDQCSKRGDLGEALRIYDEARADNVPL
SVHHYNVLLYLCSARSNSSDDISLEKGFQIFNQMGLDNVVPNEATFTSAARLAAAKEDPE
MAFDLVKKMKSYGIVPKLRSYGPALFGFCKKSMADKAFEVDAHMVENGVLAEEEELLALL
RLSSEENLVEKTYEFMHRMRSTVRQVSEETAGAMEDWFKSETAADAGLKNWDVEKVKEGI
VKGGGGWHGQGWLGKGKWSVVRTEMQENGVCHSCGEKLVCIDIDPKETENFANSVAKLAC
EREVRADFVKFQEWLAKHGPFDAVIDGANLGLINQKHFSFQQLKHVVNQLRQMSKSNRLP
LVILHRSRVFGGPAQYPNNKKLLESWRNAGALYATPPGSNDDCRVLHLIFSRYWLYAAVS
CKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTPARPGLTLHMPPPYSIVIQESEQG
SWHIPTVAGDDLETPRKWVCATRTKKKNLHSIFS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcgcatggctctgattaaaacctctcctctcttccatcttttctgcaaaacc
ccttcagccctttcttcctacacaggtcccaactgtttcaaatccctgaaacccataaca
atccatgctaagttccaaccccagagtaccttttccatgacaaagactaccaatttatgc
accgcatcagccatccttcaaggcccctcctcctcttcttcagcaataccccataagtcc
aggaagaaagcccgcagcgaatccctgctgcgtcacaagctcgatcagtgctctaagcgc
ggtgatttaggcgaggcccttcgcatttacgatgaggcaagggccgataatgttcccctc
agcgttcaccattataatgttttgctttatttgtgctctgctagaagtaatagcagcgac
gatattagtttagaaaagggctttcaaatttttaatcaaatggggttggataatgttgtc
ccaaatgaggcaacttttactagcgctgcaagattagcagctgctaaagaagacccagaa
atggcttttgatttggttaagaaaatgaagagttacgggattgttccgaaattgaggtct
tatggacctgcattgtttgggttttgtaagaaatcaatggcggataaggcttttgaggtt
gatgctcatatggttgagaatggtgttttagccgaggaggaggagcttttggccctattg
aggcttagttccgaggaaaatttagtcgagaaaacttatgaatttatgcataggatgagg
tctacagttagacaggtatcagaggagactgcaggtgctatggaggattggtttaagtca
gagactgctgctgatgctggattgaagaattgggatgtggaaaaggtgaaggaaggcata
gtgaagggaggaggcggctggcacgggcaagggtggctggggaaagggaaatggagtgtg
gttaggactgaaatgcaggagaacggagtatgtcattcatgtggagagaagcttgtttgc
attgatattgatcctaaggagacggagaattttgctaattcagtggctaaactggcttgt
gagagagaagtaagggcggattttgtgaaatttcaggaatggctcgcaaagcatggacct
tttgatgcagtgatagacggggcaaatcttggcctcattaatcaaaaacatttcagtttc
cagcagctgaaacatgttgtgaatcagttacgccaaatgagcaagtcaaatagattgcca
cttgttattttgcacagaagccgcgtgtttggtggtcctgctcagtaccctaataacaag
aaattgttggagagttggagaaatgccggtgcactttatgctactcctcctggttcaaac
gacgattgtcgtgttttgcatctcatattttccaggtattggttatatgctgctgttagt
tgtaaatgtttgttggtgacaaacgatgagatgagggaccatttattccaactactaggg
actagctttttcccaagatggaaagagaagcatcaggtgagattaactcccgcaagacct
ggacttacccttcatatgcctccaccttattcgatagttattcaggagtcagaacaaggt
agttggcatatacctactgtcgcaggagatgaccttgaaaccccgaggaaatgggtgtgt
gctaccaggacaaagaaaaaaaatctacattccatcttcagctga
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