Coffea arabica (coffee): 113726726
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Entry
113726726 CDS
T11342
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113726726
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
113726726
Peptidases and inhibitors [BR:
carb01002
]
Serine peptidases
Family S54: Rhomboid family
113726726
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
113726726
NCBI-ProteinID:
XP_071931207
UniProt:
A0ABM4WHD6
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Position
2c:20346441..20350217
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AA seq
341 aa
AA seq
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MMVGSAAFHPKFFPFPVSQVGPTAAHLITTAAALRLGDFLRHRIHLHFLLPSAPSSPNFK
SIFDLGYLPFLRDVWNERANLYSGSKILQWTHDSISSTCMALYFFNSGEDENDSSHVRKT
YSKPSRRSSFNGRKWTNILLAANVLIYVAQIATQGKLLFWGAKINSLIDKGQLWRLATSS
FLHANIGHLMVNCYSLNSIGPAVENISGPRRYLAVYITSAIASSAMSYWLSKAPAVGASG
AIFGLVGSFAVFVLRHKGMIKGSEQDLRHIMNVVVLNMAIGVLSKGIDNWGHLGGLIGGV
ATSWFLGPAWKLESISNDGHEVFADNAPIFTVIKHTRNSNR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggttggttcagcagctttccaccccaaattcttcccattcccagtatcccaggtg
ggccccacagcagcccacctcatcaccaccgctgccgctctccgcctgggtgacttcctt
cgccaccgcatccacctgcactttcttcttccctccgcaccctcctcccccaacttcaag
agcatatttgaccttggctatttgcctttcttgagggatgtttggaatgaaagggccaac
ctatattctggttccaaaattcttcaatggacacatgactctatatcttccacatgtatg
gcattatatttctttaatagtggtgaagatgaaaacgactcaagccatgttaggaagaca
tactcaaaaccttctagaagatcctcattcaacggaaggaaatggaccaacatcctgtta
gctgctaatgttttaatctatgtagcacaaattgcaactcaaggaaagctattattttgg
ggtgccaagattaatagtctaattgataaagggcaactttggaggctagccacatcgtcc
tttttgcatgccaatatcgggcatctcatggtgaattgctattctttaaactctattggt
cctgcagtcgagaacattagtggtcctagaagataccttgctgtttatatcacatctgca
attgcaagttctgcaatgagctattggctatctaaagcacctgcagtgggcgcatctgga
gcaatatttggattagttggatcttttgctgttttcgtcttgaggcataagggcatgatt
aagggcagcgagcaagatttacgacatataatgaatgtggttgttctaaatatggcaatt
ggggttttgtctaaaggcattgataactggggacaccttggaggcttaataggtggtgtt
gcaacctcatggtttcttggtcctgcttggaagctggagtccatttctaatgatggccat
gaagtttttgctgacaacgcacccatttttaccgtcattaagcatacaagaaatagcaat
agatga
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