Coffea arabica (coffee): 113726759
Help
Entry
113726759 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K23325
transducin beta-like protein 2
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
113726759
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113726759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
WDR90_beta-prop_4th
CFAP251_N
Lactonase
Beta-prop_HPS5
WD_LRWD1
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
DSE1_N
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
SHKBP1_KCTD3_C
DUF2681
DUF6476
ASA1
Nucleoporin_N
LapA_dom
choice_anch_I
Motif
Other DBs
NCBI-GeneID:
113726759
NCBI-ProteinID:
XP_027106431
UniProt:
A0A6P6VV85
LinkDB
All DBs
Position
2c:21634997..21642142
Genome browser
AA seq
442 aa
AA seq
DB search
MDSVLPVTVAVSLIVGALIAFLIFGSYFRKRKSEVESIAKPEKLQANQNLSQKQPLKTNK
KSQSKIHSHSHAADKEANKRHHPLDLNTLKGHGDAVTGLCFSTDGRNLATACGDGVLRVF
KLDDVTNKSFKFLRINLPAGAHPTAVAYADDTTSVVVATHTLSGSSLHMYGEEKPKATGE
SKQQTKLPLPEIKWEHKKVHDKRVILTLVGTKATYGGADGSTVIVSCSEGTDITLWHGKT
GKVLGHVDTNQLKNTMATVSPNGRFIAAAAFTADVKVWEIVYTKDGSVKEVSKVMQLKGH
KSAVTWLCFAPNSEQVITASKDGSIRVWNINVRYHLDEDPKTLKVFPIPLHDANGTTLHY
DRLCLSPDGKILAAIHGSTLQWLSAESGQVLETAERAHDGDITDMAWSPTPIQSGDKKLS
VLATASIDKKVKLWVAPMLHPS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggattcggttcttccagttacagtagcagtatcgttgatcgtaggagctttaatcgca
tttctaattttcggaagctatttccggaaacgaaaatccgaagtcgagtcgatcgcgaag
cctgaaaagcttcaagcgaatcaaaatctaagccaaaagcagccgttgaagactaacaag
aaatctcagtccaaaattcactctcactctcacgccgccgataaggaggcgaataagcgg
catcatccgctggatttgaacacgctgaaaggtcacggtgatgcagtcacggggctgtgt
ttttctacggatggacgtaatttggcgactgcttgtggcgatggggttctgagggttttc
aagctggatgacgttaccaacaaaagcttcaagtttcttagaattaacttgcctgccgga
gctcatccaacagcagttgcttatgctgatgatacaacttctgtagttgttgcaactcat
acgctgtctggctcttcgctgcatatgtatggagaagagaaacccaaagcgactggtgag
tctaagcaacaaacaaagcttcctctgccggagatcaaatgggagcacaagaaggttcat
gacaagagggtcattcttaccctagttggaaccaaggcgacatatggcggtgcagatggc
agtactgtaatcgtgtcatgttccgaaggcacagacattacactctggcatggaaaaaca
ggaaaggtcttgggtcatgttgacacgaatcagctaaaaaacaccatggcaactgtatcc
cccaatgggagattcatagctgctgcagcttttactgctgatgtgaaggtttgggagatt
gtgtacaccaaagacggatcagtgaaggaagtttcaaaggttatgcagctcaaggggcat
aagagtgcagttacatggctgtgctttgccccaaattcagaacaagtcattaccgcatcc
aaggatggttcaattagagtctggaacatcaatgttcgatatcatctggatgaggaccca
aaaactttgaaggtgtttcccattccacttcatgatgcaaacggcacaactttacactat
gaccgtctgtgtctctctcctgatgggaagatattagctgccattcatggttcaacattg
cagtggttatctgctgagtctgggcaagttttggaaacagctgagagagctcatgatggt
gatatcacggacatggcatggtcccctacccccattcaaagtggagataagaaattgtcc
gttttggccacagccagcattgacaaaaaagtgaagttgtgggtggctccaatgcttcat
ccatcatga
DBGET
integrated database retrieval system