Coffea arabica (coffee): 113726842
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Entry
113726842 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113726842
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113726842
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
113726842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_UBOX
RING_XB3-XBAT31
Prok-RING_4
zf-C3HC4_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
113726842
NCBI-ProteinID:
XP_027106535
UniProt:
A0A6P6VVJ1
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All DBs
Position
2c:22616443..22633234
Genome browser
AA seq
907 aa
AA seq
DB search
MGSTGEADRKRRQFSSISPTGAAAKKHPFMPLSEDKKLDAAVLKFQNQKLVEKLEAQKIE
IIDFKEKIGKLTVKQLPYENVVAVVSNSWEETVKDLESHSIHTNDCAKCERGVKDLLVRD
GANPLPYNGGGSSPSDTFSSRDASPDDALLSRLLVTGATESSSTCNVTNNTEEGNHEDSK
KIRNTLHTILAAVDHQWKLKDNLCSTALSAFSEDGSHRQRTSLDLQAEVKNVRMSIGNLH
SKHKSLAFELQKHKDSEAKSKAELKHLRVIHLFVCLCKEELESTIAELEESNHQLAVLKA
EKDAGKGPIFPILNLGNKAVAVDKSRDKEKDLQDMESALSNLLDQSSCRLLELKRLHEER
IDVLKHLSTLQNTLKNIKSICSSQAYLLLKDQATKVKADIVQYQALYEKLQVEKDNLAWR
EKEMHLRVELLDINHRSASVADLRITELEKGIQKYINEKNLIEVKLEEALREPSRKEIIA
KFKALVSSFPVEMGHMQSQLSKYKETATDIHTLRADVKSLSSILEQKAKHLGKLSARSAE
QAASILKLQAVVHDLKESDKELKLILQMYRRESITSRDVLEARDSEYKAWAHVQSLKTSL
DEHNLELRVKTAIEAEATSQQRLAATEAEIAELRQKQEASKREESKLSGVVKSRHEETDA
YLSEIETIGQAYDDMQTQNQQLLQQITERDDYNIKLVIGGVRTRQLGDGLLMEKQAIERA
IQQANTSVDFQNLKVARFEDQLKMCSDHVQRLAENRVKLTVSLENNQKKVIDIRKSAQQL
RETIEDSQPKVDSNRVDLAEVQIETERERFKRKREEEDLEFARSKVSRLKSQVEGSSVVD
KLRQEVREYREILKCSICLDRRKEVVIAKCYHLFCNSCVQKIIETRHRRCPVCSVSFGAN
DVKPVYI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacaggagaagcagatagaaagcggcgtcaatttagctccatatcgcctact
ggtgctgctgccaagaagcatccttttatgccattatctgaggataaaaagctggatgcg
gcagtgcttaaatttcaaaatcagaagctcgttgagaaattagaagcacagaaaatcgag
attattgatttcaaggagaaaattggtaagctgacggtgaaacaactgccatatgagaac
gttgttgcagttgtcagtaattcctgggaagagactgttaaggacttggaatcacattct
atacacacaaatgactgtgcgaaatgtgagcgaggtgtcaaagatctacttgtcagagat
ggtgcaaatcctttgccttataatggcggtggttcttctcctagtgacaccttttcttca
agggatgcttcacctgatgatgctttgttaagccggcttttagtgacaggagcaactgaa
agtagttctacctgtaacgtcacaaacaatacagaagagggtaatcatgaagacagcaaa
aagatcaggaacacattgcatacaattctagctgccgttgatcatcaatggaagttaaag
gataatttatgcagtacagctttgagtgcattttctgaagatggatcacaccggcaaagg
acatctctagacttgcaggcagaagttaagaatgtaagaatgagtataggcaatcttcat
tcaaagcacaaatcattggcttttgaactgcaaaagcacaaggattcagaggcaaagagt
aaagctgaactgaagcatttaagagtgattcatctttttgtttgtctatgtaaagaggag
ttggaaagtactatagcagaacttgaggaaagtaatcatcaattagcagttctaaaagca
gaaaaagatgcaggaaaggggccaattttccccatccttaatctgggtaataaggctgtt
gctgttgacaagtccagagataaagaaaaggatctgcaggacatggagtcagcacttagc
aacttattggatcaatcgtcttgtcggctattagaactgaagcgtcttcatgaagaaagg
atagatgtattgaagcacttatccactttgcagaacactttgaaaaatatcaagtcaatt
tgctcttcacaagcttatctccttttgaaagatcaagctacgaaggttaaagcagatata
gtccaatatcaagcactctatgagaaactacaggttgagaaagacaatttggcctggagg
gaaaaggaaatgcatttgagagttgaattgctcgatattaaccatcgatctgcctctgtt
gctgatttgaggatcactgagctggaaaaagggatacagaagtatataaatgaaaaaaat
cttattgaagtcaagctggaagaagcattaagagaacccagtagaaaagaaatcattgca
aagttcaaagctttggtttcttcatttcctgtggaaatgggccatatgcagagtcagctg
agtaaatacaaagagacagctactgatattcatactctacgtgctgatgttaaatctctg
tctagtattcttgagcaaaaggccaaacatttgggaaaattgtctgctaggtcagctgag
caagccgctagcattctaaagttacaggccgtagtccatgatttgaaggagagtgataag
gaattgaaactcattttgcaaatgtatagacgtgaatcaattacttcaagggatgtcctt
gaagctagagattctgaatataaggcttgggctcatgtacagagcctgaagacctctctt
gacgaacacaacttggagttgcgagttaaaactgctattgaagctgaggctacatcccag
caaaggctagctgccactgaagctgaaattgctgagctcagacagaagcaggaggcttct
aaaagggaagaatcaaaactttctggggttgtgaaatccagacatgaagagacagacgcc
tatctttctgagatagagactattgggcaggcctatgatgatatgcaaactcaaaaccaa
cagttgttgcagcaaatcacagagagggatgactataatataaagcttgttataggagga
gtgcgaacaagacagcttggggatggcctgctcatggagaaacaggctatagagagagca
attcagcaagccaatacttctgtcgattttcagaatctgaaagttgcaagatttgaggac
cagttaaaaatgtgctcagatcatgttcagaggctggcagaaaacagggtgaaacttaca
gtttctcttgaaaataaccaaaagaaggtaatagacatccggaaatcagcacagcaactg
agagaaacgatagaagattcacagccgaaggttgacagtaaccgtgtggatcttgctgag
gtgcaaatagagacagagagagaaagatttaagaggaagagggaggaagaagacctagaa
tttgctaggtcaaaagtttctcgtctcaaatcacaggtagaggggtcatcagtcgttgat
aaacttcggcaggaagtcagagaatacagggaaatacttaagtgcagcatctgtcttgac
aggcggaaagaggttgttatagcaaaatgctatcatctgttctgcaattcctgcgttcaa
aagattattgagacgcgtcaccgcagatgcccagtatgttcagtgagttttggggctaat
gatgtaaaacctgtttacatctga
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