Coffea arabica (coffee): 113726900
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Entry
113726900 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113726900
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113726900
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
113726900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
113726900
NCBI-ProteinID:
XP_027106619
UniProt:
A0A6P6VU58
LinkDB
All DBs
Position
2c
Genome browser
AA seq
372 aa
AA seq
DB search
MSFLYPPPPPPPITTASPGGSSSTTIVIPHPQYDSSIHPDVMNDTSPSPSPSASIIIVII
VIASAIIVSASIYLLLRFLSRRCHRTFRTFSSTSVADDVVLQNRRISVSGCVDDRRVADS
SLFDSLPLFTFGSVTGKLAAGDCAVCLSKFEPQDQLRLLPLCCHAFHAHCIDTWLASNLT
CPLCRIAVNASDADVLSKIIASSEGTQRNNDMNSNGNNNVNRSGSFRVEIGSISSRRGTS
DTSGDGRRSYSIGSFDYIVDDGCEVPVDSTHHRGVSDCTSTDKESFGIPVTGPPGESLAA
EVAGGRSWLRDYVDRLSSFSFSSRTMSFRSSGRYMFGSSRRNDVVVPVADLEANPNPIGE
EIGEYFRWLSGV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttttatatccaccgccacctcctcccccaatcacaaccgccagccccggcggc
tcatcttccaccacgatcgtcatccctcatcctcagtacgacagctccattcaccctgac
gtcatgaacgacacctcaccttccccttccccctctgcctccatcatcatcgtcatcatc
gtcattgcttctgctattatcgtctccgcctccatctacctccttctccgcttcctctcc
cgccgttgccaccgcactttccgcacattttcttccacttcagtcgcggatgacgtcgtg
ttgcagaaccggcgaatttcggtttctggatgcgtagacgaccgtcgtgtagcggatagc
agcttgttcgactcgttgccgcttttcactttcggctccgtcacgggaaagctcgccgcc
ggggattgcgctgtctgcctttcgaaatttgagccccaggatcaactccgactgctacct
ctgtgttgtcacgcgtttcatgctcattgtattgacacgtggcttgcctccaacttgact
tgtccgctctgccggattgccgtaaatgcatcagatgccgacgtactcagcaaaatcatc
gcctcctctgaaggtactcagaggaacaatgatatgaatagcaatggaaataacaacgtg
aacagaagcggcagtttcagggtcgagataggtagtatcagtagccggcgaggaacatct
gacacctcgggagacggtcggaggtcctattctatcggttcatttgattacatcgtcgac
gacggatgtgaggttccggttgactcgacgcatcacagaggcgtctctgattgtacttcg
acggataaggagtcctttggcattcccgttactggtcctccgggagagagtttggctgca
gaggtggccggcggtcggagttggcttagagattacgtggacaggttgagttctttctcg
ttctcttctcgtaccatgtcgttccggagctccgggaggtacatgttcggaagcagtcgc
cggaacgacgtggtcgtcccagtcgccgacttggaggcgaatccgaatccaataggggag
gagattggcgagtattttcggtggctatcaggggtatga
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integrated database retrieval system
