Coffea arabica (coffee): 113727161
Help
Entry
113727161 CDS
T11342
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
113727161
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113727161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113727161
NCBI-ProteinID:
XP_071933000
UniProt:
A0ABM4WMI2
LinkDB
All DBs
Position
2c:complement(29730606..29749697)
Genome browser
AA seq
1763 aa
AA seq
DB search
MAPKSGKAKPHKAKGERKKKEEKVLPTVIEITVDTPEDSQVTLKGISTDKILDVRKLLAV
HVETCHLTNYSLSHEVRGSRLKDSVEITSLKPCHLTIVEEDYTESQAAAHIRRLLDIVSC
TTSFGVTSSSPKSDGKPGSKDTGHKESGSAESEPGPENVVSESTSKPKLSGKKSGTVSPH
ERLKPAKPESISNDGDLAEKNGDASAAIMCPPPRLGQFYDFFSFSHLTPPIQYIRRSNRP
FLDDKSEDDFFQIDVRVCSGKPTTIVVCEKGFYPAGRRILLRHSLVGLLQQLSRVFDAAY
KSLMKAFSEHNKFGNLPYGFRANTWVVPPFVAEQPSTFPPLPVEDENWGGHGGGQGRDGK
HDNRQWAKEFAILAAMSCKTAEERQIRDRKAFLLHSLFVDISVFKAVAAIKNLVENNQHS
PTGSSSIENEQKLGDLLITVTKDMADASMKLDCKNDGIRVLGMSQEELTKRNLLKGITAD
ESATVHDTSTLGVVVVKHCGYTAIVKVVAETNQNDSLVSQDIDIEDQPEGGANALNVNSL
RMLLHKTPTSQASRLVQRSNTTDLEDLRTSRSLVRKVLGEGLLRLQAEDTKQAKPIRWEL
GACWVQHLQNQSAGKTDSKKGEDKVEQAVKGLGKSGGLLKDIKKKLDDRNSNSEQRKEAA
NDGFDVGKKELEELDEAKETMWKQLLSEASYLRLKDSETGLHLKSPSELIEMAHKYYADS
ALPKLVWLVPRDYDMDTSCPFKKTDIISMIPVYKHVACSSADGRTLLESSKTSLDKGKLE
DAVNYGTKALSRFVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELG
LDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEE
GLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQI
LQAKLGPDDLRTQMFLQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLL
DYITPDEVRDAQKKQARAKVKGKIGQYGEAVEDKYNKDELLSPAHSVVENSSDKENKSEL
LFMETIDKNHDLFPAEQTILNEPDDLVQDNRSEEGWQEALPKGRSSMGRKPPGLRRPNLA
KLHTNLTNTSQVSKFHGKSTTFSSPRTSSNESAAASTLTPAPKKFGKSSSFSPKSINPAI
SIGGVEKSANPKSAPVSPASTDLVSKADETISSVSIQTAGKHFSYKEVALAPPGTIVKAV
TEKSPNESSVEASLPIRKETGVASKSEVIERNNGEEIQVNSPIEEKSTVDLDGQMDEDSN
RKEQIEEIATTLVKSLEGDETEDSKGKGSEVTEGKQERSIVESKEGEAGQGSVLEGENSS
SSEKSELGTSKVEVSERPGGKCKEASSENESISTSAENTTPLSQKHEFNPKDEVEAIQEK
LSAENEANEDKEIASSLSNGGVKQGDSETGKGTSKKLSAAASPFNPSSVPVFGSVPAQSF
KELGGLLPPPVNILPLLPVSPAHRSPHQSATARVPYGPRLSGGYTGSRNRVPRNKTVYHS
DEHNGDASHFSLPRVMNPHASEFVPGQPWVPNGYPIAPNGYIVYSNCTAVSPNAYPIPQN
GVLVSPNGSSAPSHVFPVTQNGLPVPVESVETRSVAEHVEGQNEVGSDGCKEESSMNLTG
ESSIVEKVEENQSDDGEKPCDDESGVAEKSCTDPEKKTTDTATQIPEIVAAKESCGSILV
EKTKTKCWGDYSDGETEIVEIKS
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggctcctaaaagtgggaaggctaagccccacaaagctaaaggagagaggaagaagaaa
gaagagaaagtattgcctacagttatagaaataacagtagatacacctgaggattcacaa
gtgacacttaagggaatatcgacggataaaattctagatgtgagaaagcttttagcggtc
catgtcgagacatgccacttaaccaactactccttgtcacacgaggtcagaggttcacgg
ctgaaggattccgtcgaaatcacctctctgaaaccatgccacctcactattgttgaagag
gactacactgaaagccaagccgcggcccacattcgacgactactcgacattgtctcttgc
acgacgtcgtttggcgttacatcttcttcgcccaaatctgacggtaaacccggttcaaag
gatacaggtcacaaggaatccggttctgctgagtccgaacccggcccggaaaatgtcgtt
tccgaatcgacttctaagcccaaactctccggcaagaagtccggcaccgtttctccccac
gagagactcaagccggcgaagcccgaaagtatttccaatgacggagacttggcggagaaa
aatggcgatgcttccgcagctataatgtgtcctccgccgcggctcgggcagttctatgat
tttttctccttctctcatctcactcctcccatccaatatattaggagatcaaatcgacca
tttctggatgataaatccgaagatgatttctttcaaattgatgttagggtttgtagtggg
aagccaacaacaattgttgtttgtgagaaagggttttatccagctggaagaagaattctt
ctgagacattctttggtcggattactccaacaattaagcagagtttttgatgctgcatat
aaatctctgatgaaagctttcagtgagcacaataaatttgggaatcttccttatggtttt
cgagcgaatacatgggttgtaccaccttttgttgctgagcagccatcaacatttcctcca
ttgcctgttgaagatgagaactggggaggacatggaggtggacaaggaagagatgggaag
catgataataggcagtgggcgaaagaatttgcaattttggcagcaatgtcgtgtaagaca
gcagaggaaaggcaaattcgagatagaaaagcctttctacttcacagtttattcgttgac
atttcagtctttaaggctgttgcagcaataaagaatcttgtggaaaataatcagcactcg
ccaactggttctagttccatcgaaaatgaacagaaacttggagatctactgattacggtg
acaaaggacatggctgatgcaagtatgaaattagattgcaagaatgatgggattcgtgtt
cttgggatgtcacaagaggaacttactaagcgaaatttactcaaagggataactgcagat
gaaagtgcaactgttcatgatacttctactctgggtgttgtggttgttaaacactgtggc
tatacagctattgtgaaagtggtagctgaaacaaatcagaatgatagtttagtttcccag
gacattgacattgaggaccagcctgagggaggtgcaaatgccttgaacgtgaatagctta
agaatgctgttgcacaagacaccaacatcccaagcatccagactggttcaaagatcaaat
actacagacctcgaagatttacgtacatctaggtcattggtaagaaaggtgttaggtgaa
ggtttgttgaggttgcaagcggaggacaccaaacaagcaaaaccaattagatgggagctg
ggggcctgttgggtgcaacatttacaaaatcaaagtgcaggtaaaactgactctaaaaaa
ggtgaagataaagttgagcaagctgtaaagggtcttggaaaaagtggtggactgctcaag
gatattaagaaaaaactagatgaccgaaactcaaattctgagcaaagaaaagaagctgca
aatgatggttttgatgtgggaaagaaagagcttgaagagttagatgaggcaaaagaaacg
atgtggaaacaactgctttctgaagcatcatacttgcgccttaaagattcagagactggt
cttcatctaaagtcacccagcgagttgattgagatggcacacaagtactatgctgatagt
gcacttccaaaactggtgtggctggttcccagggactatgacatggatacatcttgccct
tttaagaagacagacattataagcatgatacctgtatacaagcatgttgcgtgttcatca
gctgatgggcgtactttgttagaatcatcaaaaacatccttggataaaggtaaactggag
gatgctgttaattatggaactaaggcactctccagatttgtatcagtttgtggaccttac
catagaatgacagctggagcatatagtcttcttgccgtggttctctaccatactggagat
tttaatcaggctacaatttaccagcaaaaagctttggatataaatgagagggagcttgga
cttgatcacccagatacaatgaaaagttatggagacttggctgttttttactatcggctc
cagcatacagagttggccttaaagtatgtcaatcgcgcattgtatctcttgcatctaact
tgtggaccatctcatccaaatacggctgcgacttacattaatgttgcaatgatggaagaa
ggtttgggcaatgtccatgttgctctgaggtacctccatgaggctcttaaatgcaatcaa
agacttcttggagctgatcatatccagactgcagccagctatcatgctatagcaattgct
ctctctttgatggaagcatattcactgagtgttcagcatgaacaaaccactcttcaaata
ctgcaggcaaaacttgggccagatgatcttcgtacacagatgtttcttcaggatgcggct
gcgtggcttgaatattttgagtcaaaggccctggagcagcaagaagcagctcgcaatggt
accccaaaaccagatgcctctatttctagcaaaggacatttaagtgtgtcagatttgctg
gattacataacgccggatgaagtaagggatgcccaaaagaaacaagctcgtgcaaaggtt
aaaggcaaaataggacaatatggggaggctgttgaagataaatataacaaggatgaattg
ctatcaccagctcattctgtggtggagaattcgagtgataaagagaacaaatctgagctt
ctatttatggaaactattgacaagaaccatgatttatttccagcagagcaaacaatatta
aatgaacctgatgatcttgtgcaggataatagatctgaagaaggatggcaagaagcttta
cctaagggtcgctcatcgatgggccgaaagcctcctggcttaaggaggcccaacctcgca
aaactgcacaccaacttaacgaacacttctcaggtatccaaattccatggtaaaagcacc
actttctcatctccaaggacatcatctaatgagtctgctgctgcttccacacttactcct
gctccaaagaagttcgggaagagttctagcttcagtccaaagtcaattaatcctgcaatt
tcaattggtggtgtagaaaaatcagctaacccaaaatcagcccctgtgagccctgcttct
actgatctggtgagtaaggctgatgaaaccataagttcggtcagtattcagacagctgga
aaacatttttcctacaaagaagttgctttagctccacctggtacaatagtgaaggcagtg
actgaaaagtctccaaatgaaagttctgtagaagcaagtcttcccataaggaaggagaca
ggtgtggcatctaaaagtgaagtaatagaaaggaataatggggaggaaatacaagtgaac
agtcccatcgaagagaaatcaacagtggatcttgatgggcaaatggatgaagattccaac
agaaaagaacaaatagaagagatagctactaccttagtaaaatctttagaaggagatgaa
actgaagattctaaaggaaaaggatctgaagtcactgagggtaaacaagaaaggagtatt
gttgaaagcaaggaaggagaagccgggcaaggttctgttttggaaggtgagaattctagt
tcttctgaaaagtcagaacttggcacttccaaagtggaagtgtctgaaagaccgggtggc
aaatgtaaggaagcgtcgtctgagaatgaatctatttctacttcagcagaaaataccacc
ccgctgtcacaaaaacatgaatttaacccaaaagacgaagtagaagctatacaggagaag
ctttctgctgaaaatgaagcaaacgaagataaagaaattgcaagttctttatccaatgga
ggagtaaaacaaggggattctgagactggaaaaggaacaagcaagaagctttctgcagct
gcttctccatttaatccatcatcagttccagtttttggctcagttccagcgcaaagcttt
aaagagcttggaggattattgccccctcctgtaaatattctaccactgcttccagttagt
ccagctcatagatcaccacatcagtcagcaactgcaagagttccatatggtccccgactc
tcaggtggctatactggatcaagaaatcgggtaccacgtaataaaactgtttaccacagt
gatgaacataatggggatgcaagtcatttcagcctgccacgagtaatgaacccacatgca
tctgagtttgtccctggccagccatgggttccaaatggttatccaattgctccaaatggt
tatatagtttattcaaattgtactgctgtatcaccaaatgcttatcctataccccaaaat
ggtgtactagtttcaccaaatggctcttcagcaccctcccatgtttttcctgtgactcaa
aatgggttaccagtaccagtagaatctgtagaaactcgttcagttgcagaacatgttgaa
ggtcagaatgaagtaggatcagatggatgtaaagaggagtcctccatgaacttgacaggt
gaaagctcaatagtcgagaaagttgaagagaatcaatctgatgatggtgaaaaaccatgt
gatgatgagtctggagttgccgaaaagtcatgtacagatcctgaaaaaaagaccacagat
acggcaacccaaattcctgagattgttgctgcaaaagaaagctgtggtagcattctggtg
gagaagactaaaactaaatgttggggagattatagtgatggtgaaactgagattgttgag
atcaaaagttga
DBGET
integrated database retrieval system
