Coffea arabica (coffee): 113727240
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Entry
113727240 CDS
T11342
Name
(RefSeq) syntaxin-71
KO
K08506
syntaxin of plants SYP7
Organism
carb Coffea arabica (coffee)
Pathway
carb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113727240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113727240
Membrane trafficking [BR:
carb04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
113727240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5089
Ran-binding
NPV_P10
Spc7
MDFI
Dna2
TBCC_N
Motif
Other DBs
NCBI-GeneID:
113727240
NCBI-ProteinID:
XP_027107111
UniProt:
A0A6P6VXA3
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All DBs
Position
1c:complement(52761212..52763616)
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AA seq
261 aa
AA seq
DB search
MSVIDIVFRLDDICKKYEKYDVEKQRSLKTSSEDAFARLFASFESQIEAALQKSEMAAME
TSRAKVVAMNAEVRRVKARLMEEVPKLQKLAQKKVKGITKEELEIRYDLVLALPERIRAI
PDGTSSAAKQTGGWGASASKRNIKFDSDGHLGDDFFQQSEESSQFREEYEMRKLKQDQGL
DVISEGLDTLKNLAQDMNEELDRQVPLIDEIDTKVDKATSELKNTNVKLKHKITEIRSSQ
NMCIDIILLCILLGIAAYLYK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatagatattgtgttcagactcgacgacatatgcaagaaatacgagaaatac
gacgttgaaaagcagcgttccctcaagacctcctctgaggatgcctttgctcgcctcttt
gcttccttcgagtcccaaatcgaagctgctctccagaagtcggagatggctgcaatggag
acaagcagggcaaaggtggtggctatgaatgctgaggttcggcgcgtaaaggccagatta
atggaagaggttcctaaattgcagaaactcgcccagaagaaggtcaaggggatcacaaag
gaagaactagagattcgttacgatctggttctagcattaccggagaggattcgtgccata
ccagatggaacttccagtgctgcaaaacaaacaggaggttggggtgcttcagcgtctaaa
agaaatattaaatttgactcagatgggcacttgggtgatgatttctttcaacaatctgaa
gaatcaagccaatttagggaagagtatgaaatgcgcaaactaaaacaggatcaaggttta
gacgttatctcagaaggtctggatacactgaaaaatctggctcaagatatgaatgaggag
ctggataggcaagttcccttaattgatgaaattgacactaaggtggacaaagcaacatct
gagctcaaaaacacaaacgttaaactcaagcacaaaataactgagattaggtccagtcaa
aacatgtgtatcgacatcattcttttatgtattcttctcggaatcgctgcctacttgtac
aagtga
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