Coffea arabica (coffee): 113727287
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Entry
113727287 CDS
T11342
Name
(RefSeq) CSC1-like protein At3g54510 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113727287
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113727287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
SidD_C
Motif
Other DBs
NCBI-GeneID:
113727287
NCBI-ProteinID:
XP_027107157
UniProt:
A0A6P6VZ04
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All DBs
Position
2c:37456562..37474057
Genome browser
AA seq
706 aa
AA seq
DB search
MKAENLLASASINIGVAMFILSLFSILKKQPSNAPIYYPRRISLNHHIFLDERFTFSRFL
PSLEWVRRASRVSEGQILQQCGLDVLVFIRLFKFGINFFTVSCVVGVLVLLPLNYIDADR
LSSQFHSVNSFTISNIIGGSNRLWVHLSCLYFISCYGLYLLYKEYKDIWLKRIQQLHNLR
HRPDQFTVLVREIPFCNEHKAYGCCVDHFFSKHYPSSYQSYQILYDCEELEKLLIHGKSI
RERIEKLTQQSLTNRYTRRSDSSKIEILKEMLQDVCHKIRHIRGEVMLSEKELPVAFVTF
RSRLGAALAAQSQQHSNPLVWITGIAPEPRDVLWSNLAIPYRHLPLHEIVVFLLASLLTI
FFAIPVTAIQGIAKFEKLRKWFPPAMAVQLIPGLRSIVTGYLPSVILNFFIYIVPFSMIA
MAQMAGYISRSKKDIKACNMVFYFLVGNAFFLSLLSGSLLDQIGESFTHPKDFPGHLAGA
VSAQADFFMTYILTNGLFGFSLEILQPGLFMWNYIKSHTWHRGKRKTAYLNSIPYYRIIP
FVALSILIGMVYAIISPLLLPFLVGYLLLGYVVFINQIEDVYITCYETCGQYWPYIYQYI
LAALILMQITMVGVFGLMSKPSASISTIPLLLLTFGFNEYCKRRFVPTFHKYSMQDAKKN
DELDEQNGVMETNLQNALDAYCPPCLRPVDFEVEESCSTQPLISPK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagaaaatttgctggcatcagccagcatcaacataggagtagccatgttcatc
ctttcactattttccatactgaaaaagcagccttcaaatgcaccaatatactatccacgt
cgcatttctctgaatcaccatatctttttggacgagcgttttaccttttcccgatttctt
ccctcactggaatgggttcgtcgcgcatcgcgagtttccgaagggcagattcttcagcag
tgtggtcttgacgtgctcgtcttcattagactgtttaaattcgggatcaattttttcact
gtttcctgtgttgttggtgtattggttttgcttccacttaactatattgacgctgacaga
ctatcttcacaatttcattccgtgaattctttcacaatatctaatattataggaggttct
aacaggctgtgggtgcatctttcttgcttgtattttatttcttgctatggattataccta
ttgtacaaggaatataaagatatctggttgaaaaggattcagcagctacataacttaagg
catcgaccagatcaattcactgtcctagttcgagagatccctttttgcaatgagcacaaa
gcttatggttgctgtgtggatcactttttttctaaacactatccatcttcttatcaatca
tatcagattctgtacgactgcgaggaactcgaaaagttgctaattcatggcaaatcaatc
agagaaaggattgagaaattgacacagcagtcattgactaatagatatacaagacgatca
gatagctcaaaaatagaaatactcaaagaaatgcttcaagatgtgtgtcataagatacga
cacataaggggtgaggtgatgctttcagaaaaggagttgcctgttgcatttgttacgttc
aggtctcgcttgggtgctgcattagctgcccaatctcaacagcactcaaatcctctagta
tggatcacaggaatagccccagaaccaagggatgttctctggagtaatttggcaattcct
tatcgacacctgccgctgcatgaaattgttgtcttcttgttagcatcacttctcacaata
ttctttgccatccctgtcacagctattcaaggaattgcaaaatttgaaaaattacgaaaa
tggtttccacctgcaatggcagtgcaattaataccaggactaagatccattgtgacaggc
tatctaccaagtgtgattctgaatttttttatttacattgttcccttttccatgattgct
atggcacaaatggcgggttatatttcaaggagtaagaaggacataaaagcttgtaatatg
gtcttctattttcttgtgggaaatgcattcttcttaagcttattatctggatccttacta
gaccaaattggggaatctttcactcatcctaaagattttcccggtcatctcgccggtgcc
gtttctgcccaagcagactttttcatgacatacatcttgacaaatgggctgtttggattt
tctttagagattctccaaccaggattattcatgtggaactacataaaatcccacacatgg
caccgcggaaagaggaaaactgcatatcttaactcaataccttattaccgaattattcct
tttgttgctctctctatattgattggcatggtatatgcaattatctcgcccttgcttctg
ccatttctagttggctacttactgctaggctatgttgttttcattaatcagattgaagat
gtttacataacttgttatgagacgtgtggtcaatattggccatacatttatcagtacatt
cttgctgctctcatcctaatgcaaataactatggttggtgtctttggactgatgtcgaag
ccctccgcatccatttctacaattcctctgcttcttctcactttcggttttaatgaatac
tgcaagaggcggtttgttccaacatttcacaaatactctatgcaggatgcaaagaaaaat
gatgaacttgatgagcaaaatggtgtgatggagactaacttacaaaatgcacttgatgct
tattgccctccttgtttgcgacctgttgactttgaagttgaagaatcttgctcgacacag
ccattaatatccccaaaatga
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