KEGG   Coffea arabica (coffee): 113727330
Entry
113727330         CDS       T11342                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
carb  Coffea arabica (coffee)
Pathway
carb03013  Nucleocytoplasmic transport
carb03015  mRNA surveillance pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113727330
  09122 Translation
   03013 Nucleocytoplasmic transport
    113727330
   03015 mRNA surveillance pathway
    113727330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113727330
   03041 Spliceosome [BR:carb03041]
    113727330
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113727330
Spliceosome [BR:carb03041]
 Complex C
  Other components
   EJC/TREX
    113727330
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 113727330
NCBI-ProteinID: XP_027107228
UniProt: A0A6P6VVU8
LinkDB
Position
2e
AA seq 153 aa
MAETGDENAGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVT
PAVLKECRRIVVESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTAKIGSLVDVNTS
KDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 462 nt   +upstreamnt  +downstreamnt
atggcggagacaggggacgaaaatgcaggggagttttacttgaggtactatgtcggccac
aagggtaaatttgggcatgagttcttggagttcgagtttaggcccgacggcaagctccgg
tatgctaataattccaactataagaacgacaccatgatccgtaaagaggtcttcgtcacc
cccgccgttctaaaagaatgccgtcgcatcgtcgttgaaagcgagataatgaaggaagat
gacaacaattggccagaaccagatcgcgttggaaggcaagagctggagattgtaatgggg
aacgagcacatatcttttactactgctaagattggttctctcgtggatgtcaataccagt
aaagatcctgaaggtcttcgaatcttctattatcttgttcaggatttgaagtgtttcgtg
ttttctcttatctcactccacttcaagatcaaacccatttga

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