Coffea arabica (coffee): 113727362
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Entry
113727362 CDS
T11342
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113727362
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
113727362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113727362
NCBI-ProteinID:
XP_071932081
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Position
2c:complement(55188334..55199583)
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AA seq
1400 aa
AA seq
DB search
MDKNSWRAPQGQMAQGPPQGGQVGGSGEVSAVPNPAPPATIDSGDWRTQLQADSRQRIVN
KICAHMCRMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDYLRKISLKMLTME
TKSQNPMANPLQANAANASKNPPDQAVHGMQSQIQNQPLPMPVVSSQSQSRQQLLPQNMQ
TNMTSTGVQNSAILASTLPTAGNLQQAPMPNIGQNSNLQNMQSVPSVSQNPVGSSMGQVM
PSNVFTNSQRQMQAGQQQVVPLQQHQQTQNPQHYLYQQQLQHQYMKQKLQQGGGMAQPLM
QSHIQQQQQQNLLQPTQIQTSQQVVMQPSVMQSAPLSGLQQNQQSSMQQVTQPVIQQQSQ
AVLRQQQQQQQQQQQQQQQQSQQASMLHQQQTSMAQQPLLPAAQQPHQQQQQLIGQQPGA
TNIQHNQLIGQQNSMPDMQQQQQRLIGQQNNMQQQQQQQLIGQQNSLSSMHQQQLAPQSS
VSGLHQQSMLGTQPGNSALPTSQHSVVMLQQSKVAVQQQMQQNATALLPSQNQQPQQPQQ
QMVSQIQAQPGGLQHMQQQSNALQRDMQQNIQPTGSLLQQQNVVEQQKQLFQPQRAHPEA
SSTSLDSTAQTGNASGGDWQEEVYQKIKSMKDMYFLELNDMYMKIAGKLQQHDSLPQQPR
NEQLEKLKFFKLMLERLIGFLRCTKNDIQISHKEKLASIEKQIINILTTNRPRRPVSLQQ
VQLAQQQMSNMQHSQPQTQIPQIQPQENQMNQQMQPMNVQSSITPMQPSSLTSLQQNTLS
SVPSVSNLQQNMMSTLQPASTLDPGQSNTHPLQQVAISSLQQNTASGPQTMNINSLSSQS
GMTALQSNLNNALQPNSTMIQNQQLKKQEQQMLQTQQLKQQLHPRQMQQQLLQRQQLMQQ
QQQQQQQQQQQHQQMKPQQQPSQLPGHQMSPLHQVTDSSDLKVRPQISVKSSVFQQFHTN
SQRAAYHHQQLKSGSPFPISSPQVLQAASPQVPPHGSPQIDQQSMLTSIAKTGTPLQTAN
SPFVVPSPSTPLAPSPMPGESEKLNSGISSLSNAGNIGPSHAITVSAAAQSLAIGTPGIS
ASPLLAEFTSLDGAHVSTSTAMPCKPHTVEKPHERLIKAVKSISNKALVASIDDISSVVS
MVDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVS
PVGSVNDSMRQLNGSDAFELESTATSSIKRARNEANHALVEEIHEINRRLIDTVVDISDE
DVDPTAVAAAADGGEGTIVKCSFSAVALSPNLKSQYASARTSPIQPLRLLIPTNYPDSSP
ILLDKYPVEVSKEYEDLSIKARSKFSISLRSLSQPMSLLEMARTWDICARAVISEFAQQS
GGGTFSSKYGTWENCVSAVL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaacagttggagggcgcctcaaggccagatggctcagggtcctcctcaaggt
ggtcaagtaggcggcagtggagaagtatcggctgtcccaaatccagctccgcccgctact
attgacagcggcgattggaggactcaactccaagctgattctcgtcaaagaatcgtaaat
aagatatgtgctcacatgtgcagaatggagactttgaagaggcacctgccattctctgga
caagaggggctgcaagaacttaagaaaattgctgtgaggtttgaggaaaagatttatact
gcagcaactagccagtcagattatctgagaaagatatctttgaagatgctgacaatggaa
actaagtcccaaaatcccatggctaatccactacaagctaatgctgccaatgcaagcaaa
aatcctccagaccaagctgtccatggcatgcaatcccaaattcagaaccagccacttccc
atgccagtggtgagcagccaatcacaatcccgacaacagctgttaccacaaaacatgcag
actaatatgacatcaacgggagtccagaattctgctattttggcttctacacttccaact
gctggtaatttgcagcaggctcccatgcctaatattggtcagaactccaatttgcagaac
atgcagagtgttcccagtgtttctcagaacccagtagggagttccatgggacaggtgatg
ccttcaaatgttttcactaattctcaaagacagatgcaggctggacaacaacaggttgtt
cccttgcagcaacaccagcagacacagaatccacagcattatctttatcaacaacagctg
cagcatcagtacatgaaacaaaagttacaacaaggaggaggaatggcacagccccttatg
caatctcatatccagcagcagcagcagcaaaatcttttgcaaccaactcaaattcaaacc
tcccagcaagttgttatgcagccatctgtaatgcagtcagctcctctatctggcctccag
cagaatcaacagtcttctatgcaacaagtgactcaaccagtaattcagcagcagtctcaa
gcagttttgaggcagcagcaacagcagcagcaacagcagcagcaacaacagcagcaacag
tcgcaacaggcttccatgttgcatcagcagcaaacctccatggctcaacagccattactg
cctgcagcacagcagccacatcaacaacagcagcagctgattgggcagcagcctggtgct
acaaatattcaacacaaccagctcattggccaacagaatagcatgcctgatatgcagcaa
cagcaacaaaggctgataggccagcagaacaatatgcagcagcagcagcagcagcagcta
attggtcaacagaacagcctttcgagtatgcatcaacaacaattggcccctcaaagtagc
gtttctgggctccatcagcagtcaatgctagggactcaacctggtaactctgccctgcca
acaagtcagcattctgtcgtcatgttacagcaatctaaggttgcggtacagcaacaaatg
cagcagaatgcaacagcattgctaccaagccaaaatcaacagccacagcaaccgcagcaa
cagatggtatcacagattcaagcacaaccagggggcctacaacatatgcagcagcagtca
aatgcgttgcaaagagatatgcagcaaaatattcaacctacaggttctttgcttcaacag
cagaatgttgtagaacagcagaagcagttatttcagccacaaagagcccatcctgaggca
tcatcaacttcgttagattcaacagctcagacggggaatgcaagtggtggagattggcag
gaggaggtttatcaaaagattaaatccatgaaggacatgtatttcctggaattaaatgac
atgtacatgaaaattgctggaaagctgcaacagcatgattctcttcctcaacaaccaaga
aatgagcagcttgaaaagctcaaattctttaagctcatgctggaacgcctaataggattc
ttgcgatgtaccaagaatgacattcagatcagtcacaaggagaagttggcttccattgaa
aaacagataatcaatattcttactacaaatcggccccggaggcccgtttctttgcaacaa
gtgcaacttgcccaacagcaaatgtccaacatgcagcactctcagcctcagactcaaatt
cctcaaatacagccccaggaaaatcaaatgaaccaacagatgcagccaatgaatgtacag
agttccataacaccaatgcagccaagtagcttgaccagcctgcagcagaacacattgtcc
tctgtgccatcagtttcgaatttgcaacagaatatgatgagtaccctacagcctgcttcg
actttggacccaggacaaagtaatactcacccgttgcagcaggtagctataagctcttta
cagcagaatactgccagtggtcctcaaacaatgaacataaattctttatcatcgcaaagt
ggcatgactgcgctgcaatcaaacctcaataatgctctacagcctaattcgactatgatt
cagaaccagcagcttaaaaaacaggagcagcaaatgttgcaaacccagcaattgaaacaa
caattgcatccccgtcagatgcagcagcagcttttgcaaagacaacagctaatgcaacaa
caacagcagcaacaacaacagcagcagcaacagcaccaacaaatgaagccacagcagcag
ccttcacagctgcccggacaccaaatgtcaccactacatcaggtaactgattcaagtgac
ttgaaggtgagaccgcagataagtgttaaatcaagtgttttccagcaattccataccaac
agccagcgagcagcgtatcatcaccaacagttgaagtcgggaagcccatttcctatttct
tcaccgcaagtccttcaggcagcatcgcctcaggttcccccgcatggttcgcctcaaatt
gatcagcagagtatgctgacatctatagcaaagactggaactccattgcagactgcaaat
tcaccctttgtggtcccatctccttcgactcccttggctccgtcacctatgcctggcgag
tcagaaaaactaaattctggcatttcatccctctcaaatgctggaaatattggaccctca
catgcaattactgtgtctgcagcagcccaatcactagcaattggcactcctgggatatca
gcttcgccattgcttgcagaatttacgagtttggatggagctcatgtcagcacatcaact
gcaatgccatgcaagccacatactgtcgagaagccgcatgaacggttgattaaagcggta
aaatcaatttcaaataaagcattggttgcctccattgatgatataagctcagttgtcagt
atggttgataggatagctggatctgcaccaggcaatggatcaagagctgctgttggtgag
gatttggtcgcaatgacaaaatgtcgcttgcaagcaagaaactttttcacacaagatgga
cctactggaacaaagaaaatgaggcgctctacgagtgcaatgccttccaatgttgtttca
cctgttggtagtgtgaatgacagtatgaggcagttaaacggttctgatgcctttgaattg
gaatccacagctacatcaagtatcaaaagggcaaggaatgaggccaaccatgcccttgtg
gaagagatacatgagataaatcgacgcctcatagatactgtggttgatatcagcgatgaa
gatgttgatccaactgcagtagctgctgcagctgatggtggtgaagggaccattgtcaag
tgctctttcagtgctgtagctcttagcccaaacctgaaatcacagtatgcttcagcacgg
acgtctccaattcagcctctgcgattgctcattccaactaattatcctgattcctctcct
atactcttggacaagtatcctgttgaagttagtaaagagtatgaagatctttctattaaa
gccaggtccaagttcagtatatcactgagaagtctttcacagcctatgtcacttttggag
atggcaaggacgtgggacatttgtgctcgtgcagttatttcagaatttgcacaacaaagt
ggtggaggaactttcagctcaaaatatgggacttgggagaactgtgtgagtgcagttttg
tga
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