KEGG   Coffea arabica (coffee): 113727498
Entry
113727498         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
carb  Coffea arabica (coffee)
Pathway
carb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113727498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carb03400]
    113727498
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     113727498
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_RIG_2nd RAWUL WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_Aladin WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 113727498
NCBI-ProteinID: XP_027107502
UniProt: A0A6P6VWJ1
LinkDB
Position
2c:66642433..66659731
AA seq 762 aa
MHRVASAGNTSSSVRPRKEKRLTYVLNDADDTKHCAGINCLAVLKPTVPDGLDHLFTGSR
DGTLKKWELTEDGATCSTTFESHVDWVNDAVLVGGNTLVSCSSDTTVKAWNCLSDGTCVR
TLRQHTDYVTCLAAAEKNSNIVASGGLGGEVFIWDLETALAPHSKSSDATEDDCSNGVCG
SGSSLPVSLRPINSSNSISLHTTQSQGYVPIAAKGHKESVYALAMNESGTLLVSGGTEKV
VRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCIHSYAVH
TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPILQLALHDDGIWVATT
DSSVHRWPAEGRNPQKVFQRGGSFLAGNLSFSRARISLEGSTPVPVYKEPSFSILGTAGI
VQHEILNNRRHVLTKDTAGMVKLWEITRGVVIENYGEVSFEKKKEELFEMVSIPAWFTVD
TRLGNLAVHLDTPQCFSAEMYSADLNIIGKPEDDKVNLARETLKGLLAPWLTKRRQRFGS
QASGNVEVQSGKDVSSRSITLSRVEVDGNAENDSMVYPPFEFSVAAPPSIITEGSLGGPW
RKKITDLDGSEDEKDFPWWVLDCVLNNRLPPRENTKCSFYLHPCEGSTIQILTQGKLSAP
RILRIHKVVNYVVEKMVLDKPLDNMNSDGMFPVAGGQLPHPAAGGDGSFRSGVKHWQKLK
PCIEILCNNQVLSPDMSLATVRTYIWKKPEDLVLNYRVVQGR
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagcgagtgcagggaatacgtcaagttctgttcggccccgaaaagagaag
agattgacttatgttctgaatgatgcagatgacacaaagcactgtgcaggtatcaattgt
ttggctgtgctaaaacccacagtgcctgatgggcttgaccacctcttcactgggagtcgc
gatggcacgttaaagaaatgggaactgactgaagatggtgctacctgctccactactttt
gaatcacatgttgattgggtcaatgatgctgtccttgtaggtggaaacacacttgtgtcc
tgctcctcagatacaactgttaaggcctggaattgcttgtctgatggaacatgtgtgagg
acccttcgtcagcacactgactatgtcacttgccttgccgctgcagaaaaaaatagcaat
attgttgcctccggtgggttaggtggagaagtattcatatgggatcttgaaactgcactt
gctccacattctaagtcaagcgatgcaactgaagatgactgttcaaatggagtctgtggg
tcgggaagttccttgccagttagtcttcgacccattaactcaagcaatagcatttcctta
cacacaactcagtctcaaggatatgttcctattgctgccaaaggccataaagagtcagtt
tatgcattggccatgaatgaaagtggaacacttcttgtttctggtggaactgagaaggtt
gtgcgtgtttgggacccaaggactggttcgaagaccatgaaacttagaggacacacagat
aatattagggcgctgctgttagattctactggcagattttgcttatcaggatcttctgac
tcaatgatcagactatgggatcttggtcagcaacgatgtatccattcctatgctgtacat
actgattctgtttgggcacttgccagcactccaacttttagtcatgtttacagtggcgga
agagacctttcgttatacttgactgacttggcaacaagagaaagtgtattgctttgtaca
aaggaacatcctattttgcagttggcattgcatgatgatgggatttgggttgcaacgaca
gattcttctgtacatagatggccagctgagggacggaatcctcagaaagttttccaaaga
ggtggttcatttttggctggcaacttgtcattttcaagggcaaggatttcattagagggt
tcaactccggtgcctgtttataaggaaccatcgtttagcatccttggcactgcaggaata
gtgcagcatgagattttgaataatcgtagacatgtcctaacaaaggatactgctggtatg
gtgaaattatgggaaatcacaaggggcgttgtaattgaaaactatggagaggtttcgttt
gagaagaagaaagaagaactgtttgagatggtaagtattcctgcttggttcactgtagat
acaaggcttgggaacttggctgttcatttggatacaccacaatgtttttctgcggagatg
tattctgctgacttgaacatcattggaaaacctgaggatgacaaggttaatttagcccgg
gaaacccttaaagggctgttagctccttggttaaccaaacgaaggcaacggtttggttct
caggcttcgggaaacgtggaagttcaatctggtaaagatgtatcttctaggagtattacc
ctatcaagagttgaggttgatggaaatgctgaaaatgattcaatggtttatccgccattt
gaattttcagtagctgcacctccttctattattactgaggggtctctaggtggtccgtgg
agaaagaaaatcacagatttagatggaagtgaagacgagaaagacttcccctggtgggtc
ttggattgtgtattgaataatcgccttcctcccagggaaaataccaaatgtagtttttat
ttacatccgtgtgaaggttcaaccatccagatcttaacacaaggaaagctgagtgcgccc
cgtattttacggatacataaggttgtcaactatgttgtagagaagatggttcttgataag
ccgcttgataatatgaactcagatggaatgtttcccgtggctggagggcagttgccacat
ccagcggctggaggagatggttctttccgatcaggggtgaaacattggcaaaagctgaag
ccttgtatagagattttgtgcaataaccaggtcttatcccctgacatgagcttggccact
gtccggacatatatatggaaaaaacctgaagatctagtgctaaactaccgagtggtgcag
ggcaggtga

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