Coffea arabica (coffee): 113727643
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Entry
113727643 CDS
T11342
Name
(RefSeq) autophagy-related protein 18a-like isoform X2
KO
K22991
WD repeat-containing protein 45
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113727643
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
Others
113727643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR3_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_Gbeta
DUF7099
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
113727643
NCBI-ProteinID:
XP_027107715
UniProt:
A0A6P6VYQ7
LinkDB
All DBs
Position
2c:70782246..70787804
Genome browser
AA seq
463 aa
AA seq
DB search
MTSAVSSSSPWLLPTPPPAPSPSNMAPPNPPPAPPPPPSSSSHDRGHEEEEEDSSSIASS
VSDFSDIYTASTATTIQTPQNPNPTTPNSTTTASAAQSLPPPTLLHLSFNQDHGCFAAGT
TSGFRIYNCDPFREIFRRDFSSSSSSTASAVVGGGIGVVQMLFRCNILALVGGGPDPQYP
LNKVMIWDDHQARCIGELSFRSEVKSVRLRRDRIVVVLLQKIFVYNFADLKLIHQIETVM
NPKGLCEVSHVSGSMVLVCPGLQKGQVRVEHYASKRTKFIVAHDSRIACFALTNDGRLLA
TSSSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSSSAQWLAVSSDKGTVHVFSLKV
DSGSLGSDRSRGAAEPNNASPTAVSHLSFIKGVLPKYFSSEWSVAQFRLAEGLQHIVAFG
HQKNTVVILGMDGSFYRCEFDPVTGGEMTQLEHHNFLKPVESF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgccgtctcttcctcctctccttggcttctccccacgccacctcctgctccc
agcccctccaatatggccccaccaaacccccctccagctcctcctccaccgccatcctcc
tcctcccacgaccgcggccacgaggaggaggaggaggattcctcctcaattgcctcatcc
gtctcggacttctccgacatctacacggcttccaccgccaccacaattcaaacgccccaa
aaccctaaccctactacacccaactccaccaccaccgcctccgcagcccaatcattgcct
cccccaactctgctccacctctccttcaatcaagaccacggctgctttgccgccggcacc
acctcgggcttccgcatctacaattgcgacccttttcgggaaatcttccgccgggacttc
tcctcgtcctcctcctccactgcctctgctgtggtaggaggtggaattggggttgttcag
atgctcttcaggtgtaatattttagcactggttggtggcgggcctgacccccagtaccca
ttgaataaagtaatgatctgggatgatcaccaagctcggtgtattggagaattatcgttt
cgatcagaggttaagtctgttcggctgagacgggatcgaattgtggtggttttattgcag
aagatatttgtttacaactttgcggacttgaagctgatacatcagattgagactgtgatg
aatccaaaagggctttgtgaggtttctcatgtttctgggtcaatggtgctggtttgtccc
ggtttgcaaaagggacaggttagagtggagcattacgcctcaaagaggacgaaatttata
gtcgctcatgactccagaatagcgtgttttgcgctcactaatgatgggaggttgcttgct
acctcgagtagtaaggggactttagtccgagttttcaatactctagatggatcactgctt
caggaggtgaggagaggagcggacagagcagagatttacagccttgctttttcttcgtct
gcccagtggctagctgtgtcaagtgataaaggaactgtacatgtctttagcctaaaggtt
gattctggatctttaggaagtgatagatcacgtggagcagcggaaccaaacaatgcatct
ccaactgcagtttcacatctctccttcataaaaggagttttaccaaagtatttcagttct
gagtggtcagtggctcaatttaggttggcggaaggcttacagcacattgttgcttttggc
caccagaagaacactgttgtaatccttggcatggatggaagtttctatagatgtgagttt
gatccagtgacaggtggagaaatgacccagctagaacatcacaatttcctcaagccagta
gaaagtttctga
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