KEGG   Coffea arabica (coffee): 113727750
Entry
113727750         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113727750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113727750
Spliceosome [BR:carb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    113727750
SSDB
Motif
Pfam: PRP38 HIND
Other DBs
NCBI-GeneID: 113727750
NCBI-ProteinID: XP_027107876
UniProt: A0A6P6WHU2
LinkDB
Position
2c
AA seq 400 aa
MANRTDPSAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGSRKPTPFICLVTKMLQIQPDKEIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDVYRYL
EPLYNDYRKLRQKTNDGRFGLTHVDEFIDELLTTDYSCDISLPRIKKRWTLEALGSLEPR
RSALEDDFEEEEEKDEDDQLAAGSDDGDHEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDRDYDRDRDYDRDRDYDRDRGRGRDRDRDRERERDRDRHRLREDKEYGRERERER
EGRERDRRDRDRGRRRSHSRSRSRSRDRKDRDEERRKRHARSSASPRRRGDGPDDSTTRD
EPKKKKEKEKKKDDGTDHPDPEIAEANRLRASLGLKPLKL
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcgaaccggacggacccgtcggcgaagagcataagggggacgaatcctcaaaatctg
gtggagaagattgtccggtccaagatttaccaaaacacctactggaaggagcaatgcttc
ggtcttacggccgaaaccctagtcgataaagcaatggagctcgaccacctcggcgggacc
tacggcggcagtcgcaaacccactcctttcatttgccttgtcaccaaaatgctccaaatt
caacctgacaaagagattgttgtcgagttcatcaagaacgaagattacaaatatgtccgt
gttcttggagcattctatttgagattgacagggacagatattgatgtttatcggtatttg
gagcccttgtataatgattatagaaagctcaggcaaaaaacgaatgatggaagattcggt
ttgactcatgtggacgagttcattgatgaacttttgacaacagattactcgtgtgatatt
tcattgccccgtatcaagaaaaggtggactcttgaagccttaggttctttagaacctaga
agaagtgctctggaagatgattttgaggaagaggaagaaaaggatgaagacgaccaacta
gctgcagggtcagatgatggggatcatgagaaggattactaccgcgggcgtagtccaaca
agggaaagagatcgggatagaagacgagacagtcatagatacagggatcgagattatgac
cgagactatgatagggatcgagattatgatcgagatcgggactatgatagagatagagac
tatgacagggatcgtggcaggggacgagatagagatagggatcgagagcgggagagggat
agggaccgccatcgcctgagagaagataaggaatatggtcgggagagagaacgtgaaaga
gaaggtagggaacgtgataggagagacagggatcgtggccggcgtagaagtcactcaagg
agccgaagtagaagtagagatcgcaaggaccgtgatgaagagcgtcgtaagagacatgct
cgcagcagtgccagtcccagaaggcgtggggatggacctgatgatagtaccactcgggat
gagccaaagaagaagaaagagaaggagaagaagaaggatgatggaactgaccatccagat
ccagagattgcagaggcaaatagacttcgtgcatcccttggtttgaaacctttgaagcta
taa

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