Coffea arabica (coffee): 113727750
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Entry
113727750 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113727750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113727750
Spliceosome [BR:
carb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113727750
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Paralog
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
113727750
NCBI-ProteinID:
XP_027107876
UniProt:
A0A6P6WHU2
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Position
2c
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AA seq
400 aa
AA seq
DB search
MANRTDPSAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGSRKPTPFICLVTKMLQIQPDKEIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDVYRYL
EPLYNDYRKLRQKTNDGRFGLTHVDEFIDELLTTDYSCDISLPRIKKRWTLEALGSLEPR
RSALEDDFEEEEEKDEDDQLAAGSDDGDHEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDRDYDRDRDYDRDRDYDRDRGRGRDRDRDRERERDRDRHRLREDKEYGRERERER
EGRERDRRDRDRGRRRSHSRSRSRSRDRKDRDEERRKRHARSSASPRRRGDGPDDSTTRD
EPKKKKEKEKKKDDGTDHPDPEIAEANRLRASLGLKPLKL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggacccgtcggcgaagagcataagggggacgaatcctcaaaatctg
gtggagaagattgtccggtccaagatttaccaaaacacctactggaaggagcaatgcttc
ggtcttacggccgaaaccctagtcgataaagcaatggagctcgaccacctcggcgggacc
tacggcggcagtcgcaaacccactcctttcatttgccttgtcaccaaaatgctccaaatt
caacctgacaaagagattgttgtcgagttcatcaagaacgaagattacaaatatgtccgt
gttcttggagcattctatttgagattgacagggacagatattgatgtttatcggtatttg
gagcccttgtataatgattatagaaagctcaggcaaaaaacgaatgatggaagattcggt
ttgactcatgtggacgagttcattgatgaacttttgacaacagattactcgtgtgatatt
tcattgccccgtatcaagaaaaggtggactcttgaagccttaggttctttagaacctaga
agaagtgctctggaagatgattttgaggaagaggaagaaaaggatgaagacgaccaacta
gctgcagggtcagatgatggggatcatgagaaggattactaccgcgggcgtagtccaaca
agggaaagagatcgggatagaagacgagacagtcatagatacagggatcgagattatgac
cgagactatgatagggatcgagattatgatcgagatcgggactatgatagagatagagac
tatgacagggatcgtggcaggggacgagatagagatagggatcgagagcgggagagggat
agggaccgccatcgcctgagagaagataaggaatatggtcgggagagagaacgtgaaaga
gaaggtagggaacgtgataggagagacagggatcgtggccggcgtagaagtcactcaagg
agccgaagtagaagtagagatcgcaaggaccgtgatgaagagcgtcgtaagagacatgct
cgcagcagtgccagtcccagaaggcgtggggatggacctgatgatagtaccactcgggat
gagccaaagaagaagaaagagaaggagaagaagaaggatgatggaactgaccatccagat
ccagagattgcagaggcaaatagacttcgtgcatcccttggtttgaaacctttgaagcta
taa
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integrated database retrieval system