Coffea arabica (coffee): 113727803
Help
Entry
113727803 CDS
T11342
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00750
Vitamin B6 metabolism
carb01100
Metabolic pathways
carb01240
Biosynthesis of cofactors
Module
carb_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
113727803
Enzymes [BR:
carb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
113727803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNO
GATase_3
Peptidase_S51
DJ-1_PfpI
BPL_N
GATase
Motif
Other DBs
NCBI-GeneID:
113727803
NCBI-ProteinID:
XP_071933263
UniProt:
A0ABM4WNB6
LinkDB
All DBs
Position
1c:52688590..52692548
Genome browser
AA seq
251 aa
AA seq
DB search
MVVGILALQGSFNEHISALRRLGVKGVEIRKPEQLQDVTSLIIPGGESTTMAKLAEYHNL
FPALREFVQMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQIQSFEA
ELSIPEIAAKEGGPPIFRGVFIRAPGILDVGPGVEVLADIPVPFDKASSSDLGIQSPEEN
THSEKKVIVAVRQGNLLATAFHPELTADGRWHTYFLKMAGEIGEGALCCRSTSVEDPSFS
ERDKNDLPIFQ
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgggaattctggctttacagggatctttcaacgaacacatctcggccctgaga
agactgggagtgaagggagtagagataaggaaaccagaacagctgcaggatgttacctct
ctcatcattcccggcggcgagagtaccaccatggccaagttagccgagtaccacaacctg
tttcctgctttgcgcgagtttgttcaaatgggaaagccagtttgggggacgtgtgctggc
ctaatctttttggcaaacaaagccactgggcaaaaaactggtgggcaggaacttgttgga
ggtcttgattgtacagtccacaggaacttttttggcagtcagattcaaagctttgaggct
gagctttcaattccggaaattgcagccaaagaaggtggtcccccaatttttcgaggtgtt
tttattcgtgctcctggaattcttgatgtgggacctggagtagaagttctggctgatatt
cctgtcccatttgacaaagcttctagttcggaccttggcattcagagcccagaggagaat
acacattcagaaaagaaagtgattgttgcggtgaggcaggggaacttgttagcaactgct
tttcaccctgaactgactgctgatggtagatggcatacttacttcttgaagatggcgggt
gagattggagaaggggcattgtgctgccgctccacatctgtggaggatccaagcttctct
gagcgagataaaaatgatcttccaatctttcaatag
DBGET
integrated database retrieval system
