Coffea arabica (coffee): 113727810
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Entry
113727810 CDS
T11342
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
113727810
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Paralog
GFIT
Motif
Pfam:
NHL
HAD_2
Hydrolase
Thioredoxin_8
Redoxin
SGL
TEN_NHL
AhpC-TSA
Thioredoxin_2
Thioredoxin
Hydrolase_like
DUF4934
DUF5128
Fn1-VW_OTOGL
HAD
GSHPx
BilB-like
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
113727810
NCBI-ProteinID:
XP_027107969
UniProt:
A0A6P6VXX5
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Position
2c
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AA seq
1085 aa
AA seq
DB search
MALRTISPPFSTSYPPSHLADFLFLNSQSRKFFNQWRQYPKSLLFSGPRKMGLSLKACVK
LEEKGDKISTQVEWGKVSSVLFDMDGVLCNSEELSRRAAVDVFAEMGVQVTTEDFVPFMG
TGEANFLGGVASVKGVNGFNPEAAKKRFFEIYLDKYAKPNSGIGFPGAYDLIQQCKSNGL
KVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLAASKILSVPTSEC
IVIEDALAGVQAAKAAQMRCIAVTTTLSEDSLKEAGPSLIRKDIGSISLDDVLSGGSGCH
NMKVQASIQFIDHSIETSPVSSGAEIRSILDKYSSKDAVSSVEGFRGSRRDLLRYGSLAV
AVGCLLFTINNWKAVQYASPKAILNLLFGVSSPQWQVSKDESGSVRIQQFVDYIADLENS
GRAPEAPEFPPKLDWLNSAPLQLGRDLRGKVVLLDFWTYCCINCMHVLPDLDYLEKKYKD
MPFVVVGVHSAKFDNEKDLEAIRNAVLRYNVTHPVVNDGDMSLWKELGVNSWPTFALIGP
NGKLLAQLAGEGRRRDLDNLIEAALLFYGQKKMLDGSPIPLRLEKDNDPRLSTSPLKFPG
KLEVDVLNNRLFISDSNHNRIVVTDLDGNFIVQVGSSGEEGLRDGNFDNATFNRPQGLAY
NAKKNLLYVADTENHALRVIDFVNDTVRTLAGNGTKGSDYDGGKTGDAQLLNSPWDVCFE
PLHEIVYIAMAGQHQIWEHNTTNGVTRVFSGNGYERNLNGSSSINTSFAQPSGISLSPDL
KEAYIADSESSSIRALDLKTGGSKLLAGGDPVFSENLFRFGDHDGVGSEVLLQHPLGVYC
GKDGQIYLADSYNHKIKKLDPASRRVSTLAGTGEAGFRDGGALAAQLSEPSGLVEAEDGR
LFIADTNNSLIRYLDLKTKKPELLTLELKGVQPPAPKSRSLKRLRRRSGADKETIVINGG
SSSEGNLILKISVPEGYHFSKEARSKYSIDVEPENGAFIDPLEGNLSSEGSGVLHFKRAS
PSSSIGRINCKVYYCKEDEVCLYQSLTFEVPFQDLNPNSVPADITLPYTVKPKTTRSSLD
VPVAR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagaacaatctcaccacccttttctacttcttatccaccatcccatttggca
gatttcttgttcttgaactcacaatcaagaaagtttttcaatcagtggcgccaatatcca
aaatcccttttgttttcagggcccagaaagatgggcttatccttgaaagcctgtgtgaag
ctggaggaaaaaggtgataaaattagcactcaagttgagtggggaaaggtatcatcagtg
ttgtttgatatggatggagtgctatgcaatagtgaagagctatcaagaagggctgctgtt
gatgtttttgctgaaatgggagtccaagtcaccactgaggattttgtgcccttcatggga
acaggtgaagcaaactttttaggaggagttgcttctgttaagggtgttaatggattcaat
cctgaggcagcaaagaagagattttttgagatatatttagataagtatgcgaaaccaaac
tctgggataggtttccctggtgcctatgacctcattcaacagtgtaaaagcaatggcctt
aaagttgctgtggcatctagtgctgaccgcatcaaggttgacgcaaatctagcggctgct
ggtttaccagtgtcgatgtttgatgctatagtgtctgctgatgcatttgagaatttgaaa
ccggctcctgatatatttttagctgcatcaaagattttgagtgtaccaaccagtgagtgc
attgtcattgaagatgccctagctggtgtgcaagctgcaaaagcagcacaaatgaggtgt
atagccgtgacaacaacattatcagaagattcactgaaagaagctggtccatctcttatc
agaaaggatataggcagcatttcacttgatgatgtactcagtggtggctctggttgtcat
aatatgaaggtgcaggcgtctattcaattcattgaccattctattgaaacctcacctgtg
tccagtggagcagagattaggtcaatactggataaatattcaagtaaagatgctgtttcc
tcagttgaagggtttcggggttctaggcgagatcttctgagatatggcagtctggctgtt
gctgttggttgtcttcttttcaccatcaacaactggaaggcagtgcagtacgcatctcct
aaagctatcttgaatctattgttcggagttagcagccctcaatggcaagtcagcaaagat
gaatctggttcagtaagaatccaacaatttgtggactatatagcagatcttgagaacagt
ggaagagcaccagaggcgcctgaatttccacctaagctcgactggttgaactcagctcct
cttcagctaggcagggatctaagaggaaaggtggttctcttggatttctggacatattgt
tgtataaattgtatgcacgtgctaccagatctggactatttggagaagaaatacaaagat
atgccttttgttgttgtgggggttcattcagcaaagtttgataatgagaaagatttagag
gcaattcgaaatgcagttctgcggtacaatgtaactcatccagtggtcaatgatggagat
atgagtttatggaaagaattaggtgttaattcatggcctacctttgcactcattggtcca
aatggaaagcttcttgcgcagttagctggtgaaggtcgccgaagggatcttgacaatctg
attgaggcagctctgctattttatggtcaaaagaagatgttggatggctcacctattcct
ttgaggctggagaaagataatgatcctcgtttatctacatcaccattgaagtttccgggc
aagctggaagttgatgttctcaacaaccggctattcatttcagatagcaatcacaaccga
atagtagtcactgaccttgatgggaacttcatagttcaagttgggagctcaggcgaagag
ggtttacgtgatggcaactttgataatgccaccttcaatcgcccacagggactggcttac
aatgcaaagaagaacctcctgtatgtagcagatactgaaaatcatgcattaagagtgatt
gattttgtcaacgacactgttcgaactcttgccggaaatggaaccaaagggtcggactat
gacgggggaaaaacaggagatgctcagcttcttaattctccctgggatgtctgctttgag
cccctgcatgagattgtttacattgcaatggccggtcagcatcaaatctgggaacacaac
accaccaatggtgttaccagagtatttagtggtaatggatatgagagaaatttgaatggt
tctagctcgataaatacatcatttgcacaaccttctggaatttcattatctcctgatttg
aaggaagcatatattgctgatagtgaaagtagctcaattcgagcacttgacctaaaaaca
ggaggatcaaaattactggctggtggtgatccagttttttcagagaatttgttcaggttt
ggggaccatgatggagtaggctctgaagtacttcttcaacatccgttaggtgtctactgt
ggaaaagatggtcagatttatctggcagactcatataatcacaagatcaagaagctggat
cctgcaagcagaagagtgagtacgttagcaggtacaggggaggctggttttagggatgga
ggggcactggcagctcagctttcagagccttctggacttgttgaagcagaagatggaaga
ctattcatagcagataccaataatagtttaattaggtacttggacctcaagacgaaaaag
cctgagcttcttacattagagttaaagggagttcaacctcctgcgccaaagtcaagatcc
ttgaagcgccttagaaggcgatctggagctgataaagagaccattgtcataaatggtggt
tcatccagtgagggtaatctaatactcaaaatatcagtgcctgaaggataccatttctcg
aaggaagcacgcagtaaatatagcatcgatgttgaaccagagaatggtgcttttattgac
cctctggaagggaatcttagctcagaaggatctggggtgctacactttaaaagagcctct
ccttcatcttccatcgggagaattaattgcaaggtgtactactgcaaggaagatgaagta
tgcttgtatcaatctttgacctttgaagtaccattccaagatctgaatccaaactccgtc
ccagcagacatcacccttccttatactgtcaagccaaaaacaactagaagtagcttagat
gtaccagttgcccgttga
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