Coffea arabica (coffee): 113727841
Help
Entry
113727841 CDS
T11342
Name
(RefSeq) protein indeterminate-domain 13 isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113727841
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113727841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
113727841
NCBI-ProteinID:
XP_027108012
UniProt:
A0A6P6W071
LinkDB
All DBs
Position
1c:complement(52732359..52735314)
Genome browser
AA seq
523 aa
AA seq
DB search
MMSDEGLASSLRGFIQDPNPNLPNPNPNNSNPNPNSNTAKRKRNLPGTPADPDAEVVALS
PKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKKVYICPEKTCVH
HDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTL
FSRKDSFITHRAFCDALAEESARFAPIPSANLNFRNELFNGGLSSLQPAGNPQFSNSIAG
LDPATGQLNLNGQKPRLPLWLDNANTQLNNPIGNHPGNSNAFLASSSTSLPELVQMTPTN
MLGLSSQNQWFNIGGNASSSGLPRVLKEEEENRGNLSDHISSLYYNNGQNSSQHETAPAH
MSATALLQKAAQMGSTRSNSAIFGTGFGLMSSSLSSLSNFNSLNQSRNELQNFGQAENLN
GLMTSTSQSTITTNQGDGLLLGNMSSSNNLVGNLRHPSAPPTIMPGSTDRGGSQSKSSGN
EAEGGLTRDFLGVGGNESRPFLQQNELVKFASSMSSAMDFGNQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgaagggcttgcttcttcactaagagggttcattcaagatcctaatcca
aatcttccaaaccctaatcctaacaattccaaccctaaccctaattcaaacactgctaaa
aggaagagaaatcttccgggaactccagcagatccagatgcagaagtggtagcactctca
ccaaagtctttgatggctacaaatcggttcatatgcgaaatatgcaacaagggttttcag
agagaccagaatttgcagctgcacaggagaggtcacaatcttccttggaagctgaagcaa
agaaccaacaaagaagtcaagaagaaagtgtatatctgtccggagaagacttgtgttcac
catgacccgtccagagctctgggagacctcaccggcatcaagaaacatttcagcagaaaa
catggcgagaagaaatggaagtgcgaaaaatgttccaagaaatatgcggtccaatcggat
tggaaagctcatagtaagatttgcgggactagagagtataaatgcgactgcggaacactc
ttctccagaaaagacagctttatcacccatcgagctttctgtgatgcattggctgaagaa
agtgcaaggtttgctccaattccatccgcgaatcttaatttcagaaatgaattgtttaat
gggggtctaagcagtcttcaaccagccggaaatccacaattttctaatagtattgctgga
ctagaccctgccacgggccagcttaatctgaatggtcagaaacctaggctgccattgtgg
ttggataatgcaaatactcagctcaataatcctattggaaatcatccaggtaattctaat
gctttcttggcgtcaagctcaacaagcctgcctgaactggtccaaatgactccgacgaat
atgctgggattgtcttcacagaatcaatggttcaatatcggtgggaatgcttcgtcatcc
ggtctgccccgagtactaaaggaggaagaggagaacagaggaaatttgtcagaccacatt
agttcactgtactacaacaatggccaaaatagtagccagcatgaaacagcaccggctcac
atgtcagcaactgcactgttgcaaaaagcagctcaaatgggatcaacaagaagcaattca
gctatctttggaacaggctttggcctcatgagctcatctttgtctagtctttcaaatttc
aattctttgaaccaaagcagaaatgagctgcagaatttcggccaagcggaaaacttgaat
gggctaatgacttcgacatcccaatcgactataactacaaatcaaggagatggattgctg
ctaggaaacatgagctcaagcaataatttagttggcaatttgagacatccatcggcgcct
ccaacaataatgcctggcagtactgatagagggggcagccaaagtaaatcaagtggaaat
gaagctgaaggcggattaactagagattttcttggagtaggagggaatgaaagcaggccc
tttttgcaacaaaatgaattagtcaagtttgcttcatcaatgagttcagccatggatttt
ggaaaccaatga
DBGET
integrated database retrieval system
