Coffea arabica (coffee): 113727996
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Entry
113727996 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113727996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113727996
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
SR proteins
113727996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RNA_bind
DbpA
SET_assoc
Motif
Other DBs
NCBI-GeneID:
113727996
NCBI-ProteinID:
XP_027108241
UniProt:
A0A6P6W101
LinkDB
All DBs
Position
2c:74448023..74452288
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AA seq
329 aa
AA seq
DB search
MIHHGSTIPHLPQTIAPFHLSCFVKYSIPNMFHIEIMIISVPMAGFVFAPTNFSFPHSES
LVRLVIPFSNCGLVVSGAHKGGIMVENFSELALLSTFKLETCCLVSHCVDSTGFAFVYME
DERDADDAIRRLDRIEFGRKGRRLRVEWTKQERGIRRPGGSPKRSSSNSRPSKTLFVINF
DPIHTRTKDLERHFEPYGRISNVRIRRNFAFVQFELQEDASRALEALHMSKFMDRAISVE
YAIRDDDDRRNGYSPDRRGRDMSPDRRGHGRGRSPSPYRRDRGSPDYGHGSIPSSRAEPR
GSPDYGRAESPVNERYHSRSPPPRERSRS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatccaccatggttctaccatcccacacttacctcagaccattgcccctttccatttg
tcatgctttgtcaagtattcaattcccaacatgttccacatagaaatcatgatcatctcg
gtaccaatggcaggttttgtgtttgctccaacaaatttctcatttccccactctgaatca
ttggttcggttggtaattccatttagtaattgtggtttagtagtctcaggagcccacaaa
ggaggcataatggttgaaaactttagcgaattagctttactgtctaccttcaaactggag
acctgttgtttggtttctcattgtgtcgattctacaggttttgcttttgtgtacatggaa
gatgagcgggatgctgatgatgcaattagaagacttgacaggatagagtttggtagaaag
gggcgtagacttcgtgttgaatggaccaagcaagaacgtggtataagaaggcctggtggg
agcccaaaaagatcttcatctaattcaagaccttcaaaaactctgtttgttataaacttt
gatccgattcatactaggacaaaggacctagagaggcactttgagccttatggaagaata
tcaaatgtgagaatcagaaggaattttgcatttgtgcagtttgagttgcaggaagatgcc
agtagagcattggaagcactacatatgagcaagtttatggatagagctatttctgttgag
tacgcaattcgagatgatgacgacagaagaaatggttacagccctgatagacgaggccgt
gatatgtccccagatagaagagggcatggtcgtgggagatctcccagtccgtaccgcagg
gataggggaagccctgattatggtcatggatcaatcccaagttcaagagcggagcctcgg
ggaagtcctgactatggtagagctgagagtcctgtcaatgaaagatatcacagtcgttca
ccgccaccacgggagagatctcgttcttga
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integrated database retrieval system
