Coffea arabica (coffee): 113728477
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Entry
113728477 CDS
T11342
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1-like
KO
K08517
vesicle transport protein SEC22
Organism
carb Coffea arabica (coffee)
Pathway
carb04130
SNARE interactions in vesicular transport
carb04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113728477
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113728477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113728477
Membrane trafficking [BR:
carb04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
113728477
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
WHD_PARP12
Motif
Other DBs
NCBI-GeneID:
113728477
NCBI-ProteinID:
XP_027108678
UniProt:
A0A6P6VZZ9
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Position
2e:2507025..2515035
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AA seq
224 aa
AA seq
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MVKLTIIGRVSDGLPLAQGPRYVNEEENDSFSTYKQQGEFILEEISRAALPLSNTNIRID
HHCFYYIVGHGVCFMTLCDSSYPRKLVHCYLQELAKEFEKFDTSLVERITKPYSFIRFGS
IIGNIRRQYVDTRTQTNLSKLNAKSLQNVDFVTEDFSQIVKRRKRSYLLERATESSEQVS
QIWGSKKLEVIALKWTPITILSFVGAILLWTSLIARDDQGVYGY
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgaccataattgggagggtgagtgatgggttgcctcttgcgcaaggccca
aggtacgttaacgaagaagagaatgacagcttctcaacgtacaagcaacaaggagagttc
attctcgaggaaatctcaagagctgccctccccctttccaataccaacattcgcattgat
caccattgcttctactatatagtggggcatggagtttgtttcatgaccctttgcgattca
tcgtatccgcggaaactggtacactgctatctgcaggagttggctaaagaatttgagaag
tttgataccagccttgtagaaagaataacaaaaccatacagcttcattagatttggtagt
attattggaaatattagaaggcagtacgtggatactaggacgcagacaaatttgtcaaag
ctgaatgctaaatctctgcaaaatgtggatttcgtgacagaggacttctcgcagatagtg
aaaagaaggaaaagatcctacctgctagaaagagcaacggaatcatcagaacaggtttca
caaatctggggttctaaaaaacttgaggtcattgcactgaaatggacgccaattacgatt
ctctcttttgttggtgcaattcttttatggaccagcctaattgccagagacgaccaggga
gtgtatggatactag
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