Coffea arabica (coffee): 113728883
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Entry
113728883 CDS
T11342
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113728883
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113728883
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GFIT
Motif
Pfam:
Glyco_hydro_28
DUF3737
Fer4_ETF_QO
Sre
Motif
Other DBs
NCBI-GeneID:
113728883
NCBI-ProteinID:
XP_071933603
UniProt:
A0ABM4WP91
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Position
2e
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AA seq
440 aa
AA seq
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MADSLPGLFTLSAEHLAGLSSSKSLGVAFNLVSVNSPSVFSDFRSNIILVQDHQHSGYRG
LIHAENETGLGHRHPPQSRQEIKQESGFLKFRRLLSANAGLSNSARSKRSRSTGYLVNVD
NFGARADGTDDTKIQGTIRASTLMSDYEQNRRIWIKFEELRDFSVEGGGVISGNGQIWWP
KSCKVDEKQPCLGAPTAMTFDKCTNVKVTNLRIKNAQQMHLTFRDCTNVEASNLKVKSKG
SSPNTDGIHVSGSRNVQILNSDIGTGDDCISIVSGSNKVRAVGIKCGPGHGISIGSLGKN
GDEDHVSDILVNTATFAGTTNGVRIKSWQGGRGYAKNIVFENIVMRNVTNPIIIDQFYCD
KKEKDCKEQKNAVQVNSVSYRNIKGTSATEKGIIFECSATFPCEGVRMENVQLTHKGRSS
LAACNNIHVQQIGNNTPQCN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccttgcctggccttttcaccctgtccgcggagcatttggctggattgtct
tccagtaagagtcttggagttgccttcaatttagtttccgttaatagtcctagtgttttt
agtgattttcgtagtaatataatcttagttcaggatcatcagcattcgggctatcgggga
ttgattcatgcagagaatgaaactggccttggccatcgccatcctccgcaaagtcgtcag
gaaatcaagcaagaatctggattcctgaaattcagaagattactttctgcgaatgcaggg
ttatcaaattctgcaaggtctaaaaggtcgagatcaacaggttatctagtgaacgttgac
aactttggagccagggctgatggaacagatgatactaagatccaaggaaccatcagagct
tctacactcatgtcagactatgaacaaaatcgaaggatttggattaagtttgaggagctc
agagacttcagtgttgaaggtggtggtgtgattagtggaaatggacagatttggtggcca
aaatcttgcaaagttgacgaaaaacaaccttgtctaggtgctccaacggccatgaccttt
gataagtgcacaaatgtaaaagtgacaaacctaaggataaaaaatgcacaacaaatgcat
ctaactttccgggattgtaccaatgttgaagcatcaaatctgaaggtgaaatccaaagga
agcagcccaaacactgatggcattcacgtctcaggatcccgcaatgttcaaatcttgaac
agtgacattggaactggggatgattgcatttctattgttagtggatccaataaggttcga
gcagtgggtataaagtgtggaccaggccatggaatcagcattggtagcctggggaaaaat
ggtgatgaggaccatgtgtctgatattttggtgaatacagcaacatttgcaggaaccaca
aatggagtaagaataaaaagttggcagggaggacgcggatatgcaaagaacatcgtgttc
gagaatattgtaatgcgcaatgtgacaaatccgataatcatagatcaattctattgtgac
aaaaaggaaaaggattgcaaagagcagaagaatgctgtacaagtgaacagtgtgtcatac
aggaatataaaaggaacaagtgctacggagaaaggcataatatttgaatgcagtgcaact
tttccttgtgaaggcgttaggatggaaaatgtacaattaacgcacaagggacgtagtagt
ctagctgcttgtaacaatatccatgtacaacagataggaaataatacaccacaatgcaac
taa
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