Coffea arabica (coffee): 113729452
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Entry
113729452 CDS
T11342
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113729452
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113729452
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113729452
03019 Messenger RNA biogenesis [BR:
carb03019
]
113729452
03041 Spliceosome [BR:
carb03041
]
113729452
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113729452
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
113729452
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113729452
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113729452
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113729452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
113729452
NCBI-ProteinID:
XP_027109551
UniProt:
A0A6P6W4S6
LinkDB
All DBs
Position
1c:complement(54520307..54526057)
Genome browser
AA seq
311 aa
AA seq
DB search
MAAANGQGIEPAVLDDIINRLLEFRHARTLRQVQLSEAEIRSLCNASREIFLQQPNLLEL
EAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDDKILCMHGG
LSPDLTNLDQIRNLSRPTDVPDSGLLCDLLWSDPCREIKGWGMNDRGVSFTFGPDKVAEF
LMQNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI
LKPTDKKPRFL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgaatgggcagggaattgagcctgcggtacttgatgacataatcaaccgg
ttgttggagttccggcacgcgcggacgttgcgccaagtccagctctccgaggcggagatc
cggtcgctctgcaacgcttcccgggaaatcttccttcaacagcctaatctcttggagctt
gaagcaccaatcaagatctgcggtgacattcatgggcaatataccgatctcttgagacta
tttgaatatggaggatttcctcctgaggccaattatttatttcttggggattatgtggac
cgaggaaaacagagcctggagaccatctgccttctgcttgcatacaaaataaaatatcct
gagaatttcttccttttacgaggaaatcatgagtgtgcttcaattaaccgaatatatggg
ttctatgatgaatgtaaacgacggttcaatgttagactttggaaaaccttcactgaatgt
ttcaattgtcttcctgtagctgccctaatagatgacaaaatactctgcatgcatggcggt
ctttctccggatttaacaaacttggatcaaataagaaacttgtctcgtccaactgatgtt
ccagactctggcttgctttgtgatttactgtggtcagatccttgtagagaaattaaaggt
tggggaatgaatgacaggggagtttcattcacttttggtcctgataaggtggcagaattc
ttgatgcagaatgatatggacctagtttgtcgtgcccatcaagttgtggaagatggatat
gaattttttgctgataggcagctggttacaatattttctgctccgaactattgtggtgaa
tttgacaatgctggggctatgatgagtgtagatgaaagtttgatgtgctcctttcagatt
ctgaagccaactgataaaaagcctaggttcttataa
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