Coffea arabica (coffee): 113729545
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Entry
113729545 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113729545
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
113729545
TFIIIC, fungi type
113729545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_8
TPR_1
TPR_17
TPR_14
TPR_11
TPR_16
TPR_12
TPR_9
TPR_CcmH_CycH
ANAPC3
NatA_aux_su
TPR-S
ARM_TT21_5th
TPR_15
HAT_PRP39_C
PknG_TPR
RPN7
Motif
Other DBs
NCBI-GeneID:
113729545
NCBI-ProteinID:
XP_071927202
UniProt:
A0ABM4W5Z4
LinkDB
All DBs
Position
11c:complement(36067887..36088853)
Genome browser
AA seq
969 aa
AA seq
DB search
MMSKTRIDGKLHHILESSISAWVESRMEEGEGAGVVGSSSEFHADEHPMELESQLEEEHE
VDDEGEGTTANTMANIEEEDDDDEDEEEEGYKFRFSDDMDPLAFAKEDASGLQPYEQFQR
LEHDYEALAAKKRKARLQAIPQGEVPAAKKPRQRQEDVSGATMEEIMELMNYGSRRRSRK
SKRRGRRKGSRNKVSPEVTRKLGDATLHYAHGRYGEAIGMFYEVIRLSPNLPDPYHRLGL
IYNEMGDKKRALDFYMIAAHLTPKDASLWKLLVTWSVEQGDTGQARYCLSKAITADPEDI
NLRFHRASLYVELGDYLKAADSYEQISQLCPDNVKVLQTAAQLYKKCGQSERAVTVLESY
LRNYCKEPDLNVVDILASLHMEGNAHHKALEHIEHAQQVYCSGKEMPLCLRTKAGICHIH
LGNLVKAEALFNVLRHENLHDHRQLIIQIGDSLMNHGHYESAVEYYMMLVGDDVKNNGCL
YLKIAECCCCLGKRLQSIGYFYRALDKLENSVDARLALSSLLLEENKDDEAISVLCPPKE
SESLFNLNLNAAKPWWLNGKIKLKLSQIYKAKGLLEAFVDVFFPVVRETLFLETIQQKVR
PRKKLSKSVLSERIKILDHVRTDTVFHGFRPVASASDLSRASRAKKLLKKKEAKRAAALA
AGIEWISDDSEDESPQQAPRELPLPNLIRDAEHHHLIIELCKSLASLKKYWEALKIINLT
LKLASNVLSVERNEELRTLGAQIAYTIADPAHGFEYARYIVDQRPYSFSAWNCYYKVMSK
LDSRYSKHNKFLHTMRTKHKSCVPLTLIFGHQFTMISQHQAAVREYLEAYKLMPDIPLVN
LCAGTALINLALGHRLQNKHQSVAQGLAFLYNNLQLCRYSQEALYNIARAYHHVGLVSLA
ALNYEKVLTMHESDCPMPNLPNEKPDGLASPKSGYCDLRREAAYNLHLIYKKSGAIDLAR
QILKDHCVI
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaaacaaggatagacggcaagttgcatcacatcctagagagttcaattagc
gcttgggtggagagcagaatggaggagggcgagggtgctggggttgtaggtagcagcagt
gagttccatgcagatgagcatcctatggaattggaatcacaattggaagaagaacatgaa
gtcgatgatgaaggagaaggcactactgctaacactatggctaatattgaagaagaagat
gatgatgatgaggatgaagaggaagaagggtataaattcaggttcagtgatgacatggat
cctctggcttttgccaaagaggacgcatctgggctccagccttacgaacaattccagcgc
ctggagcacgactatgaagctttggctgccaaaaagcgcaaggcccgtctccaagccata
ccccaaggggaagtacctgcagctaaaaaaccacggcaacgacaagaggatgtttctggt
gcaaccatggaagaaataatggaactcatgaattatggctctagaagaagatccaggaag
tccaagagaagaggtcgacgaaagggatcaaggaataaagtcagtcctgaagtgactcga
aaacttggtgatgctactcttcattatgcccatggccgctatggagaggccatagggatg
ttttatgaagtgattcgtctttctcccaatcttcctgatccatatcataggcttgggctc
atctataatgagatgggtgataagaagagagccttggatttctacatgattgctgcccat
ttaaccccaaaggatgcatctctgtggaagcttcttgtgacatggtccgtagaacaaggt
gatacaggacaagccaggtactgcctttctaaagcaataacagcagatcctgaagatatc
aatttgcggtttcaccgtgcatctctttatgttgagttgggtgattatttgaaagctgct
gattcatatgagcaaatttcacagctctgtcccgacaatgtaaaggtactacagactgcg
gcccagctgtataaaaaatgtggccaatctgagcgtgcagtcactgtactggaaagctat
ctcagaaattattgcaaggaacctgatttaaatgtggttgatatattggcttcactacac
atggaaggcaatgcacatcataaagccctcgagcatattgagcatgcacagcaggtttac
tgctctgggaaagagatgccattatgtctacgcacaaaagctggaatatgtcatattcac
cttggaaacttggtaaaagcagaagctcttttcaatgttttgagacatgagaatttacat
gatcatcgccagttgattattcagattggagattcactaatgaatcacgggcattatgaa
tctgcagtagaatactatatgatgttggtaggagatgatgttaagaacaatggttgcctg
tatctgaaaattgctgagtgttgctgttgtctggggaaacgattgcaatcaattggttac
ttctacagagctttagacaaacttgagaatagtgttgatgctcggctggctttgtcatca
cttcttcttgaagaaaataaagatgatgaagccatttctgttctatgtcctcctaaagaa
tcagaatcactatttaacttgaacctaaatgcagcaaaaccatggtggcttaatgggaag
ataaagttgaagctttctcaaatctataaagctaaaggattgttagaggcatttgtagat
gttttttttcctgtggttcgcgagacattgtttcttgagactatacaacaaaaggtcagg
ccaaggaagaagctatcaaaaagtgttctttctgaacggataaaaatacttgatcatgtt
aggactgatactgtgtttcatggatttagacctgtagcttcagcatcagatctgtctaga
gcgtccagagcaaaaaagttactaaaaaagaaggaagcaaaaagagctgctgctctggct
gctggaattgagtggataagtgatgattcagaggatgaatctccccaacaagcgccaaga
gagcttcctcttccaaaccttataagagatgcagaacatcatcatctcattatagaatta
tgcaaatcactagcatccttgaaaaagtattgggaagcattgaaaatcatcaatttaact
ctgaaattggcctccaatgttttgtctgttgaaaggaacgaagagcttagaactctggga
gcccaaatagcatacactattgctgatcctgctcacggctttgaatatgcacgctatatt
gttgatcaacgtccttatagcttttctgcatggaactgctattacaaagtaatgtcaaaa
ctggacagtcgatattcaaagcataacaagtttttgcacaccatgcgaaccaagcacaaa
agttgtgtaccactcactctcattttcgggcaccagtttaccatgatcagccagcatcaa
gcagctgttcgggaatatttggaagcttacaagctgatgccagatattcccttggtcaat
ctttgtgctggaactgcattgataaacttggccctaggtcacagacttcaaaacaaacat
cagtctgtggcccaaggattggcatttctttacaataatttacagctttgcagatatagt
caggaagcactgtataatatagctcgagcatatcatcatgtcggtcttgtttctcttgct
gctttaaactatgaaaaggttcttacaatgcatgaaagtgattgccccatgccaaacctt
ccaaatgagaaaccagatggtctggcttctccaaagtcaggctactgtgatcttcgtcgg
gaagcagcttacaacttgcatctgatctacaagaaaagtggagcaattgatcttgccagg
caaatcttgaaagatcattgtgtcatatga
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