Coffea arabica (coffee): 113729662
Help
Entry
113729662 CDS
T11342
Name
(RefSeq) agamous-like MADS-box protein MADS3
KO
K09264
MADS-box transcription factor, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113729662
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
113729662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Ebp2
DUF1192
Motif
Other DBs
NCBI-GeneID:
113729662
NCBI-ProteinID:
XP_071937181
UniProt:
X5DUS4
LinkDB
All DBs
Position
2e:74247819..74254413
Genome browser
AA seq
253 aa
AA seq
DB search
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSS
GITKTLERYQRCSLSPQENAAERETQSWYQEVSKLKAKYESLQRAQRHLLGEDLGPLNVK
ELQNLEKQLEGALLQARQRKTQLMIEQMEELRRKERQLGDLNKQLKIKVSLEMSSLEAAE
GQGLIRGLPWLWSSSVPSGSSMFPMHTSHPSAAMDCDPEPVLQIGYHQYAPAEGPSAPRS
MAIESNIIQGWAL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagagtagagttgaagaggatagagaacaagatcaaccgtcaagtgact
ttctctaagagaagaaatggtctgctcaagaaagcttatgaactttctgttctttgtgat
gctgaagttgctctcatcattttttcaagtcgcggcaagctctacgagttcggcagctct
gggataactaaaacccttgagcgatatcaacgttgcagcttgagtcctcaggagaatgct
gctgaaagagaaacacagagctggtaccaagaggtctcaaaactgaaggccaagtacgaa
tcactacaacgcgctcaaaggcacctacttggagaagatcttggtccattgaatgtgaaa
gagttgcagaatcttgaaaagcagcttgagggagctcttctccaggctaggcaaaggaag
actcagctaatgattgaacaaatggaagagctccgaagaaaggagcggcagcttggggac
ttgaataagcagcttaagattaaggtttccctggaaatgtcatcgcttgaagcagctgag
ggacaaggcttaataagaggcctcccttggctttggagttcgagtgtaccaagtggaagc
agcatgtttcctatgcacacttctcaccccagtgccgccatggattgcgatcctgagcct
gtcctacagatagggtatcatcagtatgctccggcagaaggtccttctgccccgaggagc
atggccattgagagtaacatcatccaggggtgggctctttga
DBGET
integrated database retrieval system
