Coffea arabica (coffee): 113729856
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Entry
113729856 CDS
T11342
Name
(RefSeq) two-component response regulator-like APRR5
KO
K12130
pseudo-response regulator 5
Organism
carb Coffea arabica (coffee)
Pathway
carb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113729856
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
FAST_1
Motif
Other DBs
NCBI-GeneID:
113729856
NCBI-ProteinID:
XP_027109950
UniProt:
A0A6P6W4Q8
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Position
2e:complement(656312..662854)
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AA seq
689 aa
AA seq
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MGEVVVSSDDGGGAMELQVKETEGAAAQIGKGRTNDNIDGSASSAAATPASSIVRWESFL
PKMVLRVLLVEADDSTRQIIAALLRKCNYRVAAVPDGLKAWEVLKGRPHDIDLILTEVEL
PSISGFALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMLRGAADFLVKPVRKNELRNLW
QHVWRRQAASSAGQGPPDESVAQQKVEATAENNAVSNYSSDYMACIQKNRECFEKGSDAQ
SSCTKPEQDTEGAEMECMQGLSHPQWSKQSNLDIEQQEGCDNASKSVQASDNGTEGSQEA
SGKDGGKMARGEDLNSGVHWERYHVTYHGRDNVKDSAREAIDLIGAFDNYLKCTDGSIGS
NAGTNKFDLLPQLDLSLRRSLPSVSVNQIADERHRLNHSDASAFSRYVNRNVQPQPSTSP
STCNQQKEQKSNSDKQLSNHIIDYNSDTHGPMINSQKHVDWAIGQSGESDARFSCPQPRS
LPAPIPVRGVRFDRVNNSYGSLIPQAFGTQSGLSSVQPPGSVSHQEVSFGVNAIYQLNHQ
PGNQQQFSGLMTQNTSDTTDQNENNEGHKVEDRGHVSSATDQSANSSFCNGTVNHLHSLC
CGSNEKIDTVPFRSAAECGSEEAFRVQDGNSIRSIQREAALTKFRLKRKERCFEKKVRYE
SRKKLAEKRPRVKGQFVRQVLNEFPPENP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagtggtggtgagcagtgatgatgggggtggagcaatggaattgcaagtgaag
gaaacagagggtgctgctgcacaaatcggcaagggaaggacaaacgacaatattgacggt
tcagcatcgtcggctgcagcgacacctgcttcttccattgtgaggtgggaaagctttctc
cccaaaatggtgctcagagtcttgctggttgaggctgatgattccactcgacagattatt
gctgctcttctcaggaaatgcaattacagagttgctgcagttcctgatggcctgaaagca
tgggaggtactgaagggaagaccgcatgacatagatctcatattgaccgaggttgagttg
ccatcaatctcaggatttgctctcctcacattaatcatggagcatgagatttgcaaaaac
ataccagttataatgatgtcttcacaggattcagttagtactgtgtacaaatgcatgttg
agaggcgctgccgactttcttgtcaaacctgttaggaaaaatgagctgagaaatttgtgg
cagcatgtctggaggagacaagctgcaagcagtgctggacaggggccaccagacgagagt
gttgcacaacagaaggttgaggccacagctgaaaataacgctgtcagtaattattcaagt
gattacatggcctgcatccagaaaaaccgagaatgctttgagaaaggaagtgatgcccag
agctcttgtacaaaaccagagcaggatacagaaggagcagaaatggaatgcatgcaggga
ctctcacatccgcaatggagcaagcaaagtaatttggacatagagcaacaagaaggatgt
gacaatgcgagtaagagtgtgcaagcatctgataatgggactgagggatcacaagaagcc
agtggcaaagatggagggaaaatggctcggggagaagatcttaattcaggtgtccattgg
gaacgctatcatgtgacttatcatggtcgtgataacgtcaaggattctgctagagaagca
attgacttaattggagcttttgataactaccttaaatgcactgacggaagtattggttca
aatgctggtacaaacaagtttgatttgttgccacaattggatctttccttgagaagatct
cttccaagtgtctctgtaaatcaaattgcagatgaaagacatagattaaaccactcagat
gcatcagccttttcaaggtatgttaacaggaacgtgcagcctcaaccctcaacatcgcct
agcacttgcaatcaacagaaagaacagaaaagcaattctgataaacaattatctaatcac
atcatcgattataattctgacactcatgggccaatgataaattctcaaaaacacgtcgat
tgggctattggtcaatccggagaaagtgatgctagattttcttgccctcaacctagatcg
ttacctgccccaattcctgtaaggggtgtaaggtttgatagggtaaacaactcctatggt
tcgttgatacctcaagcgtttggtacgcaatcaggcctgtcatcggtgcagcctccaggt
tcagttagtcatcaagaagtttcctttggagtgaatgcaatttaccagctaaatcatcaa
ccaggaaatcagcagcagttttctggccttatgactcaaaacaccagtgatactacggat
caaaatgagaacaatgaggggcataaagtggaagaccgaggacatgtttcttctgccact
gatcagagtgcaaacagcagtttctgcaatggtacagtaaatcacctgcacagcctgtgc
tgtggaagcaatgagaagatagatacagttcctttcaggtctgcggcagaatgcggtagt
gaagaagctttccgagttcaggatggaaattccatcagatcaatacaaagagaagcggcg
cttacgaaatttcgcttgaaacggaaggaaagatgctttgagaagaaggtgcgatatgaa
agcaggaaaaaacttgctgagaagcgtccaagggtgaaaggacaatttgttcgccaagtg
ctcaatgaatttccacctgaaaacccataa
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