KEGG   Coffea arabica (coffee): 113729942
Entry
113729942         CDS       T11342                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113729942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113729942
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113729942
 Complex B
    113729942
 Complex C
   U2 SnRNP specific factors
    113729942
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N zf-C2H2_Trps1_1st
Other DBs
NCBI-GeneID: 113729942
NCBI-ProteinID: XP_027110098
UniProt: A0A6P6W3Z5
LinkDB
Position
2e
AA seq 512 aa
MSSTLLEVTRASHEEVERLERLIVKDLQTEPPTARDRLYQSHRVRNMIEQITETNNKLVE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVIDANDEYEQIL
REEPQIEFSGEEASGRYLDLHELYNDYLNSKFGERIEYTAYLDVFSQPHKIPQKLKFMRQ
YMEYLQKLLEYLVYFFERTEPLQDLGRIFSKVTTEFEEQWTSGNVEGWENESQENGHASD
EHPVIDLGKYSTVEELIRDSEVGPEKLKKALAALGLKTGGTVEERAKRLFLTKDKPLEEL
DRKNFAKAFHQSDLNGVLSTPLSGKDAKEIALMEAKVSKLCDLLDENIVRTKENVVKKQA
LTYEEMEAEREEEEVQAESESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCE
ICGNYSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKQLWERIQQRQGLN
KWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtcatcgaccttgttggaggtgacgcgtgcatcgcacgaggaggtggaacggttagaa
aggcttatcgtcaaggatctccagacggaaccgcctaccgccagggaccgcctttaccag
agccaccgcgttcgcaatatgatcgaacaaattactgaaaccaataacaaacttgttgag
atttatgaagataaagacaatgcgaggaaggatgagattgcggcgcttggtggccagact
gcgactgggactaacgttttcagtgcattctatgatagattaaaagagattcgcgaatac
catagacggcatcctgctgcccgtgttatagatgccaatgatgagtatgaacagattctc
agagaagagcctcaaattgagtttagcggggaggaagcttcgggacgataccttgatttg
cacgagttgtacaatgattatcttaactctaaatttggagagagaattgaatacactgct
tatcttgatgttttttcacagccacataagattcctcagaagctcaagtttatgaggcaa
tacatggaatatttgcagaaactattagagtaccttgtgtatttttttgagcgaacggaa
cctttgcaagatcttggcagaatattctcgaaggttactacagaatttgaagagcaatgg
acaagtggcaatgtagaaggatgggagaatgagagtcaagaaaatggacacgcttcagac
gagcatcctgtgattgatcttgggaaatatagtacagttgaagagttgatcagagacagc
gaagtgggacctgagaagttaaagaaggccttggctgcactgggtctgaagacaggaggt
acagttgaggagcgcgcaaagaggcttttccttaccaaggataagcctcttgaagagttg
gacaggaaaaattttgccaaagcttttcatcaatcagatctgaatggtgttctttcaact
ccactgtcaggtaaagatgccaaagagattgcgctgatggaagccaaagtgagcaagctc
tgtgacttgttggatgaaaatattgtacggacaaaagaaaatgtagtgaaaaagcaggct
ttgacatacgaggaaatggaagcagaacgtgaagaggaggaggtacaagcagaatctgaa
agtgatgacgaggaacagcagatttataatccactcaagctgcccatgggttgggatggg
aaacctataccatactggttgtataaacttcacgggcttggtcaggaattcaaatgtgag
atttgtgggaattacagctactggggtcgcagagcatatgaacggcatttcaaggaatgg
aggcatcagcatggaatgagatgccttggtattccaaatacaaaaaatttcaatgagatc
acatcaattgaggaagctaagcaactttgggagagaatccagcaaaggcagggattgaac
aagtggcgccctgatcttgaagaagaatatgaagatcaagagggtaacatctacaacaaa
aagacatacaccgatctgcaacgccagggtcttatttag

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