Coffea arabica (coffee): 113729951
Help
Entry
113729951 CDS
T11342
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113729951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113729951
Ion channels [BR:
carb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113729951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2532
Motif
Other DBs
NCBI-GeneID:
113729951
NCBI-ProteinID:
XP_027110110
UniProt:
A0A6P6W7K8
LinkDB
All DBs
Position
2e:complement(1410811..1419220)
Genome browser
AA seq
712 aa
AA seq
DB search
MNHQQEKFVRFQGWESIAGSEGQYASKDVLHVGNFRTKINSVSDKFCGGFESGSERIKSF
KDSLRSCSLTSLLPKGFRSSNRTLDPQGLFLQKWNKIFVLSCVIAVSLDPLFFYIPVING
HKKCLSFDKKLEVTASVLRSFTDIFYLIHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIAK
RYLSSYFLIDILAVLPLPQAAILIVIPRMRGARSLNTKNMLKFVVFFQYIPRVLRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQSACGNRTDCIH
ASLYCLDDHLRFKQFLNDSCPIQTPDTTRFDFGIFLNALQSGIVESMDFPRKFFYCFWWG
LQNLSSLGQNLKTSTFVWEICFAVFISISGLVLFSFLIGNMQAYLQSTTLRLEEMRVKRR
DAEQWMSHRLLPDSLKERIRRYEQYKWQENRGVDEENLIQNLPKDLRRDIKRHLCLALLM
RVPMFEKLDEQLLDALCDRLKPVLYTEHSFIVREGDPVDEMLFIMRGKLLTVTTNGGRTG
FFNSDYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALSEVEAFALIADDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCRKKLEESLREEENWLQNALAKNEGS
SPSLGATIYASRFAANALRALRRNGATNSRLTERVPPIMLQKPAEPDFTADN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccagcaggagaagtttgttaggttccagggttgggaatcaattgcaggctca
gaaggccaatatgccagtaaagatgttcttcatgttggaaactttagaacaaaaataaac
tcagtctctgacaaattttgtggaggctttgagagtggctctgaaaggatcaaaagtttt
aaagactcattgcgatcctgttcattaactagccttttgcctaaaggcttccgatctagc
aacagaactcttgatccacaaggcctgttccttcagaagtggaacaagatatttgtactc
tcgtgtgtgattgctgtctctttggatcccttgttcttttacattccagtgattaatggc
cataaaaaatgccttagtttcgataaaaagttggaggtcacagcaagtgttttgcgttct
ttcacggacatattttacctcattcatattatctttcaatttcgaactggttttattgcc
ccttcttcccgtgttttcgggagaggtgtcttagttgaagattcatgggcaatagcaaag
agatatctatcatcctactttttgattgacattcttgccgttcttccactgcctcaggct
gcaatattgattgttattcctcggatgaggggtgcaagatctttgaacacaaagaatatg
ttaaagtttgttgtgttctttcaatacataccaagggttcttcgtatttatccactctat
aaagaagtcacaagaacttctggtatactcacggaaacagcatgggctggagctgcattt
aatcttttcttatacatgcttgccagtcatgttcttggagccttttggtacttgttttca
atagaacgtgaaaccacttgttggcagagtgcttgtggaaatcggactgattgcattcat
gcatcactctactgtcttgatgatcacttacgatttaaacagtttctaaatgattcctgc
cccatacagacaccagataccacgcgttttgattttggtatatttctcaatgcccttcag
tctggtatagtggaatcaatggattttcctcgaaagttcttctattgtttctggtggggc
ctccaaaacctgagttctcttggtcagaatctcaaaacaagtacctttgtctgggaaatt
tgctttgcagtcttcatttccatctctggtttggtgttattttcatttctcattggaaat
atgcaggcatatttgcagtctacaacattaagattagaggagatgagggtaaaacgacga
gatgcggaacagtggatgtctcatcgtttgctccctgacagtttaaaggagcggatcagg
cgatatgaacaatataaatggcaggaaaataggggtgttgatgaggaaaatttgattcaa
aacctccccaaagacctcagaagagatatcaaacgccatctttgtttggctcttctaatg
agggttccaatgttcgaaaaattggatgaacaactcttggatgcattgtgtgatcgtctt
aagccagtattatacaccgaacacagcttcattgtgcgggagggtgacccagttgatgag
atgttgttcataatgcggggcaaactgctaactgtgaccaccaatggaggaaggactggc
tttttcaactctgattatctaaaagctggtgacttttgtggagaggagctgcttacttgg
gcactggacccccattcatcatctaatctcccaatatcaactagaactgttcaagctctc
tcagaggtcgaagcatttgctctaatagcagatgatttgaaatttgtggcctcacagttt
cgtcgactacacagtaagcaacttcgccacacttttaggttttactctcagcaatggagg
acatgggcagcctgttttatacaggcagcatggcgccgctattgtagaaagaagctagaa
gaatctcttcgtgaagaagaaaattggttgcaaaatgcattggcaaagaatgaagggagt
tcacccagtttgggtgccactatctatgcctcaaggtttgctgctaatgcgcttcgtgct
ttacgacgcaatggtgctacgaattcaaggttgacagagagagtgccaccaataatgctt
caaaaaccagcagagcctgattttactgctgataattag
DBGET
integrated database retrieval system
