Coffea arabica (coffee): 113730027
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Entry
113730027 CDS
T11342
Name
(RefSeq) scarecrow-like protein 8
KO
K27748
scarecrow-like transcription factor PAT
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113730027
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
GRAS
113730027
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Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
113730027
NCBI-ProteinID:
XP_027110249
UniProt:
A0A6P6W4E2
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Position
2e
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AA seq
713 aa
AA seq
DB search
MSSGFSGGGGPDFFTSSGIATGRSTNPMMPTMNMNMNMNVTNPSQLPYRSALAGILPDPA
AQIVHRGPDLIGKRSLTEFQQQHQLLQQQQQQQQHQQQMGGLGPLYSNLRNVKPRVNYQH
ASPISPLSPVDLSVISSLSPEASSISNSSSPMNPRYGRPILQQFRPQQQQQQQLQQPQPQ
PPRMMSNCGLTTTASLSNGNIIQPASSGGMPNRPNKFIPSNISSSSSVSFPNLFHNQRAV
VPMPMSVGMVTPGKQLFSAPQDQTENKMMNKLQELEKQLFDDDDEGGCGGDAVSVVTNSE
WSDTIHSLNMITTTNCKAISPSPTSSSSSCSSTSASPPIACPKQSIADVAVAISEGRMEA
ATEVLTRLAQVANPRGTSEQRLTAYMTSALRSRVNPTDYPPPVTELYTAEHSDSTQMLYE
VSPCFKLGFTAANLAIQEAISGEQPADKLHVIDFDIGQGGQYEHLLHLLATMKADKPSVL
KITTLVDSVNNGGEERLRAVRGNLEALANKLGVCLSLRVTSLRIGELNREKLGVESDEAL
AVNFAFRLYRLPDESVTTENLRDELLRRVKWLSPKVVTLVEQEMGGNTAPFVTRVKEACA
YYGLLLDSLDATVGRDCPDRVRIEEGVGRKLANSVACEGRDRVERCEVFGKWRARMSMAG
FELKPMSQTVGDSLRSKLHSVTRGSQGYTVNEQSGGVCFGWMGRTLTVASAWR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggggttctccggcggtggagggccggactttttcaccagctctggaatcgcc
accggaagatctaccaatccgatgatgcccaccatgaacatgaacatgaacatgaacgtg
accaacccttcgcagctaccctacaggtcagccctggccggaattctgccggacccggct
gcacagatcgtccaccgcggccctgacttgatcggcaaacgatctctgacggagtttcaa
cagcagcatcaattactccaacaacagcaacagcaacagcaacaccagcagcaaatgggt
ggcttaggaccgctttatagtaatcttcgcaacgtgaagcccagggtaaactaccagcac
gcgtctcccatatctcctctgtcgcctgtagatttatctgttatctcatctctttcgcct
gaagcctcctccatttcgaattcttcttcgccgatgaaccctcgctacggccggcctatt
cttcaacaattccgtccccagcagcagcagcagcagcagctacaacaaccacaaccacaa
ccaccacggatgatgagcaactgcggcttgactacgactgctagtctatccaatggaaac
atcatccaaccggccagctctggtggtatgcctaaccgacctaacaaatttattccgtcc
aatattagcagtagcagtagcgtatcttttccaaacttgtttcacaaccagcgcgcagtc
gtgcctatgcccatgtccgtgggcatggttacccctggcaaacaattgttctcagcacct
caagatcagacggagaacaagatgatgaataaacttcaggagctagaaaagcagctcttt
gacgacgatgacgaaggaggctgtggcggcgacgctgtctccgttgttacgaacagcgag
tggtctgacacgattcacagcttgaacatgatcaccacaaccaactgcaaggccatttct
ccatctccgacatcatcatcgtcttcctgttcatcgacctcggcttctccgcccattgct
tgccccaagcagtcgattgctgatgtcgccgtggcaatttcagaaggaaggatggaggcc
gcgacggaggtcctcacgcgccttgcccaggtcgctaaccccagggggacttccgaacaa
aggttaaccgcttacatgacctcagcactccgctcgcgcgtgaaccccacggattatccc
ccgccggtcaccgagctctacacggcggaacactcggactcaacccagatgttgtacgag
gtatcaccctgtttcaagctgggcttcacggccgcaaatttagcaattcaggaagctatc
tccggtgagcagccagcggacaagctccacgtcatcgattttgatattggtcagggcggg
cagtacgagcatttgctgcacttgcttgcgacgatgaaagctgacaagcccagcgttttg
aagatcactactctggtggattctgtgaataatggaggggaggagaggctgagggccgtg
cgcggtaacctcgaggcattggccaacaagttgggcgtgtgcttgagcctcagagtgacg
agtttgaggattggtgagttgaatcgggagaagttgggggtggaatctgacgaggctctg
gcagtgaattttgctttcaggctgtacaggttgccggatgagagtgtcacgacggagaat
ttgagggatgagttgctccggcgggtgaaatggctgtcgcccaaggtggtaaccctggtg
gagcaagagatgggcggcaacacggcgccgtttgtgacgcgcgtgaaggaggcgtgcgct
tactacgggctgctgttggactcgctggacgcgacggtgggcagggattgcccggaccga
gtcaggatagaggagggggtgggtcgtaagttggccaactcggttgcgtgcgaagggagg
gaccgcgttgaaagatgcgaggtgttcggcaagtggcgggcccggatgagcatggccggg
ttcgagctcaagcccatgagtcaaaccgttggtgactcactccgttccaaactccactcc
gtgacacgtggcagtcagggttacaccgtaaatgaacagtccggtggtgtctgcttcggt
tggatgggacgaacgctcaccgtcgcatctgcttggcgttaa
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integrated database retrieval system