KEGG   Coffea arabica (coffee): 113730222
Entry
113730222         CDS       T11342                                 
Name
(RefSeq) autophagy-related protein 18c
  KO
K22991  WD repeat-containing protein 45
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    113730222
Membrane trafficking [BR:carb04131]
 Autophagy
  Other autophagy associated proteins
   Others
    113730222
SSDB
Motif
Pfam: PROPPIN BCAS3_WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 CFAP251_N WD40_Gbeta Beta-prop_RSE1_2nd WDR55 Beta-prop_IFT80_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EML
Other DBs
NCBI-GeneID: 113730222
NCBI-ProteinID: XP_027110569
UniProt: A0A6P6W5C6
LinkDB
Position
2e:complement(4355780..4360181)
AA seq 418 aa
MTILSSPMSSVVSTSQEVLSPVGFGSCRSPTAEVSGPFGHSEPDFNDNDEAELFSVSWNQ
DYGCFAAGTSRGFRIYNCDPFKETFRRDLKNGGFGIVEMLFRCNILALVGGKANAQYPPN
KVIIWDDHQSRCIGELSFRSDVRAVKLRQDRVVVILEHKIYVYNFMDLKLLHQIETLANP
RGLCCLSHHLNTSVLACPGLRRGQVRVEHFGLNMTKLIKAHDSQLSCLTLTMDGLLLATA
STRGTLIRIFNTMDGTQLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRV
VGEDPESDPGTAKNPALFYQNSTSSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFA
QFHLSESIQFIAAFGSQNTVIIVGMDGSFYRCSFDPVNGGEMVQQEYFRFLKSESRPR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaccattctttcatctcccatgagttcagttgtttcaacatctcaagaagtactctcg
ccagtaggttttggttcctgcagatctccaacagctgaggtatctggtccttttggccat
tctgaaccagactttaatgacaatgatgaagcagaactgttctctgtatcatggaatcag
gattatggttgctttgctgctggcacaagtcgtggtttccgaatatacaactgcgatcct
ttcaaagaaaccttcagacgtgatcttaaaaatgggggatttgggattgttgagatgttg
ttccgatgtaacattttggcacttgttggtggtaaagccaatgcccaatatcctccaaat
aaggttatcatttgggatgatcatcagagccggtgcattggtgaattgtcatttagatct
gatgttcgtgcagtgaaattgaggcaggatcgtgttgttgtcattcttgagcataagata
tatgtttacaattttatggaccttaagcttctccatcagatagagactttggccaaccca
aggggactttgttgcctctcacaccatttaaatacttctgtgctagcttgcccaggtctt
cgccgagggcaagttcgagttgaacactttggcttaaacatgacaaaattgatcaaagct
catgattcccagttatcatgcttaactttgactatggatggtctgcttcttgcaactgct
agtaccaggggcactttgataagaattttcaatacaatggatggtactcagttacaggag
gtacgcagaggagtagatagagctgatatttatagcattgctctatctccgaatgttcag
tggctggccgtttccagtgacaaaggtactgtacatatatttagtctcagagtacgggtg
gtaggggaagaccctgaatctgatccaggcactgctaagaatcctgcattgttttatcaa
aattctacttcttcacttgatgctctcatttctcctagtactggtgccaaccctggttca
tcactgtcttttatgaaaggtgtattgccaaaatatttcagctcagaatggtcatttgca
cagttccacttatcagaaagcatacagttcattgcagcatttggatctcaaaatactgtt
atcattgttggcatggatggaagcttctacaggtgcagttttgatcctgtgaatggaggg
gagatggtgcagcaggaatatttccgctttctaaaaagtgaaagtagacctaggtag

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