Coffea arabica (coffee): 113730222
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Entry
113730222 CDS
T11342
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113730222
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
Others
113730222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
BCAS3_WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
CFAP251_N
WD40_Gbeta
Beta-prop_RSE1_2nd
WDR55
Beta-prop_IFT80_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
113730222
NCBI-ProteinID:
XP_027110569
UniProt:
A0A6P6W5C6
LinkDB
All DBs
Position
2e:complement(4355780..4360181)
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AA seq
418 aa
AA seq
DB search
MTILSSPMSSVVSTSQEVLSPVGFGSCRSPTAEVSGPFGHSEPDFNDNDEAELFSVSWNQ
DYGCFAAGTSRGFRIYNCDPFKETFRRDLKNGGFGIVEMLFRCNILALVGGKANAQYPPN
KVIIWDDHQSRCIGELSFRSDVRAVKLRQDRVVVILEHKIYVYNFMDLKLLHQIETLANP
RGLCCLSHHLNTSVLACPGLRRGQVRVEHFGLNMTKLIKAHDSQLSCLTLTMDGLLLATA
STRGTLIRIFNTMDGTQLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRV
VGEDPESDPGTAKNPALFYQNSTSSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFA
QFHLSESIQFIAAFGSQNTVIIVGMDGSFYRCSFDPVNGGEMVQQEYFRFLKSESRPR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctttcatctcccatgagttcagttgtttcaacatctcaagaagtactctcg
ccagtaggttttggttcctgcagatctccaacagctgaggtatctggtccttttggccat
tctgaaccagactttaatgacaatgatgaagcagaactgttctctgtatcatggaatcag
gattatggttgctttgctgctggcacaagtcgtggtttccgaatatacaactgcgatcct
ttcaaagaaaccttcagacgtgatcttaaaaatgggggatttgggattgttgagatgttg
ttccgatgtaacattttggcacttgttggtggtaaagccaatgcccaatatcctccaaat
aaggttatcatttgggatgatcatcagagccggtgcattggtgaattgtcatttagatct
gatgttcgtgcagtgaaattgaggcaggatcgtgttgttgtcattcttgagcataagata
tatgtttacaattttatggaccttaagcttctccatcagatagagactttggccaaccca
aggggactttgttgcctctcacaccatttaaatacttctgtgctagcttgcccaggtctt
cgccgagggcaagttcgagttgaacactttggcttaaacatgacaaaattgatcaaagct
catgattcccagttatcatgcttaactttgactatggatggtctgcttcttgcaactgct
agtaccaggggcactttgataagaattttcaatacaatggatggtactcagttacaggag
gtacgcagaggagtagatagagctgatatttatagcattgctctatctccgaatgttcag
tggctggccgtttccagtgacaaaggtactgtacatatatttagtctcagagtacgggtg
gtaggggaagaccctgaatctgatccaggcactgctaagaatcctgcattgttttatcaa
aattctacttcttcacttgatgctctcatttctcctagtactggtgccaaccctggttca
tcactgtcttttatgaaaggtgtattgccaaaatatttcagctcagaatggtcatttgca
cagttccacttatcagaaagcatacagttcattgcagcatttggatctcaaaatactgtt
atcattgttggcatggatggaagcttctacaggtgcagttttgatcctgtgaatggaggg
gagatggtgcagcaggaatatttccgctttctaaaaagtgaaagtagacctaggtag
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integrated database retrieval system