Coffea arabica (coffee): 113730234
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Entry
113730234 CDS
T11342
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113730234
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113730234
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Ortholog
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Motif
Other DBs
NCBI-GeneID:
113730234
NCBI-ProteinID:
XP_027110588
UniProt:
A0A6P6W5C3
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Position
2e:complement(4481197..4485136)
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AA seq
404 aa
AA seq
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MEKELVELFEKAKKAADAASADAGADSSPEESRCLDALKRLKKLPINYDILVSTQVGKRL
RQLTKHPRKSIQTMASDVVEMWKGIIVKETAKNRKNGNVEHEGSVKAEPGGADSGERTKV
GRVNSIKLEGSVKAEPTGADSGSDKRFQRVSSVKVEKASTASSVKVERVDRSFSSTSEKA
MKLETSSTEVKVEEDGKVSSGERMNVERITKEEKPNSDMRNTAPKLTSLLYTKDQVRDKM
REIFAEALCKVTTEVDEDLREEVDACDPYRVATMVESAMFEKWGRSTGAHKAKYRSICFN
IKDPNNPDFRRKVLLGQFPPNSIVYLSAEDMASDARQKQNEKIKEKALFECGRENSAKAS
TNAFKCGRCGKRETTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaattggttgagctgtttgagaaggctaagaaagcggcggacgctgcatca
gctgatgccggagcagattcctctccggaggagagtcgttgtctcgacgccctcaagcgg
ctaaagaagctccccattaattatgatatcctcgtatcaacgcaggttggaaaacgtctt
cggcaactgacaaaacatccaaggaagagtattcagactatggcttctgatgtggttgag
atgtggaagggtattattgtcaaagaaacggccaagaataggaagaatgggaacgttgag
catgagggttctgtaaaagctgaacctggaggtgcagattctggtgagcggacgaaggtg
gggagagtgaactccatcaaacttgagggttctgtaaaagctgagcctacaggcgcagat
tctggtagtgacaaaaggttccagagagtgagctctgtgaaggttgagaaggcgtcaaca
gctagttctgttaaagttgagagagttgatcgctctttctcttcaacttctgaaaaggca
atgaaattagaaacttcctcaactgaggtaaaggttgaggaggatggaaaggtttcttct
ggagagcgcatgaatgttgaaaggataacaaaagaagagaagccaaattctgacatgaga
aatacggctcccaagctgacttcactcctttatacaaaggaccaagtcagggacaaaatg
cgtgagatttttgcagaggccttgtgcaaggtcactactgaggttgatgaggatctcaga
gaagaagttgatgcatgcgatccttatcgtgttgctacgatggtggagagtgcaatgttt
gaaaagtggggcagatctactggtgcccacaaagccaagtataggtccatatgtttcaat
attaaggatccaaacaacccagatttccggagaaaagtcctcctggggcagtttccacct
aattcaattgtttatctgagtgcggaagacatggcaagtgatgcaagacaaaagcagaat
gagaaaattaaagaaaaagcactgtttgaatgtgggcgtgaaaattctgcgaaggccagt
actaacgcatttaaatgtggtagatgtgggaagagggaaaccacttattatcagctgcag
actcggagtgctgatgaacctatgactacatttgtaacttgtgtgaactgcaataaccac
tggaaattctgttag
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