Coffea arabica (coffee): 113730527
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Entry
113730527 CDS
T11342
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113730527
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
113730527
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NCBI-GeneID:
113730527
NCBI-ProteinID:
XP_027111054
UniProt:
A0A6P6W7N5
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Position
2e:6859626..6865428
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AA seq
1320 aa
AA seq
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MNNLKLSWELPSKLQLHSEDEVVQFAAFDIERNRIFFASSANFIYTTHIPSPQNEGTWGS
ASLSAAVDSIDMEPGDYITSMDYLMEKEALIIGTSYGLLLLYVVDDSTTEVVGRVEGGIK
CISPSPDGDLLGVITGFGQILVMTHDWDVLYEMALDDHPGDVDVHEPAVSSNYSCESPIS
WRGDGKFFATLSKEHDALPLRKKLKVWERDSGALHSVSEPVGFMGAVLDWMPSGAKIASV
YDRREEKKSPSIVFFEKNGLQRSSFGVNDNTDVKVDSLKWNCNSELLAFVVRGEDHESIK
IWFFNNNHWYLKQEIRYLKQDGVKFIWDPTKPLQLISWTVNGQIMIYNFMWITAVMDNST
AFVIDDSKILVTPLSVSLIPPPMYLFSLKFPSAVRNMAFFSHGSKHNLATFLSDGRLCIV
ELPEIDMWEELEGTEVSVEAASCDIGFGSFTHLAWLDSHVLLSVSHFTFNHVNCSLGNFS
GKDGLPAYYLQEIQVMCSEDHKPGSVTSTGWQAKISNQISVEEQVIGIIPGPLNRCSAYI
QFDGGKIVQYLSKLGGNRMVPLQKCDDMCFSSSCPWMTLALAGGFMSQKALLFGLDDNGR
LQVGRRILCDNCSSFSFYSNATDQSITHLILSTKQDLLFIVDIADIQNEQLAVKYGNFLP
AFKTRTGDDGRNYINIWERGARVIGVLHGDESAVIIQTIRGNLECVYPRKLILASIINAL
VQGRFRDALYMIRRHRIDFNVIVDHCGWKAFIQSAPEFVKQVNNLSYITEFVCAITNGNV
METLYKDYILLPCQKELNTVKSGYTDDSDSNSKISAVLLAIRKALEEQIVESPSRELCIL
TTLAQSQPPALEEALTRIKFVRQMELSGSDSPGRNNYPSAEESLKHLLWLSDPEAVFEAA
LGIYDLNLAAMVALNSQKDPKEFLPFLQELERMPAALMQYNIDLRLQRYENALRHLVSAG
DGYYEDCMRLMRSYPQLFPLGLKLISDPVKKAQILDAWGDHLSSMKSFEDAAVAYLCCSS
LEKALKAYRSSGNWRGVLTVAGLIKSGKEEVIQLAYELCEELQALGKPGDAATIALEYCG
DVKAGIDLLVSARDWEEALRIAFLHLRDDLVSEVKIACLECANLLIGEYEEGLEKVGKYV
ARYLAVRQRRLLLAAKLRSDEQSVAELDDETASEVSSSFSGMSAYTTGTRRGSAASISST
STKGRGRQRNKGKIRAGSPGEEMALVEHLNGMALATGAKHEIKSLLMSLLMLGEEDLARK
LQRACENFQLSQMAAVKLAEDAMLTDSMDDHVYSLEHYIWKVRKEVHNLEAFSWQSRVLV
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagctctcatgggagctaccgtcgaagcttcaattacactcggaagat
gaagttgtccaatttgcagcatttgatattgaacgcaaccgtatcttcttcgcttcctcg
gccaacttcatatacacaactcatattccatctcctcaaaatgaaggaacatggggttca
gcttcattatctgccgcagttgactctattgatatggaaccgggagattacattacttcc
atggattatctgatggagaaggaagcactgataattgggacttcgtatgggcttctcttg
ctatatgttgtggatgatagtaccacagaagtggtcggacgagtggagggtggcataaag
tgcatttcgcctagtccagatggagatttgcttggtgtaattactgggttcggtcaaata
ctagtgatgacgcatgattgggatgtgctatatgagatggcactggatgatcatcctggg
gatgttgacgtacatgaaccagctgtctcctccaactattcttgtgagagtcccatttct
tggcgaggtgatggcaaattctttgcaaccctaagcaaagagcatgatgcacttccctta
cgtaaaaaacttaaagtttgggaacgagattcaggtgcacttcactctgtctcagaacca
gtgggtttcatgggagcagttttggactggatgcccagtggggcaaaaattgcatctgtt
tatgatcgaagggaagaaaagaagtccccatcaatagttttctttgagaagaatggattg
caacgaagctcatttggtgttaatgataacactgatgtaaaggtagactctttgaagtgg
aattgtaactctgagcttcttgcatttgtggtcagaggtgaagatcatgagtctatcaag
atttggttcttcaataataatcattggtatttgaaacaagagattagatacttaaagcag
gatggagttaaattcatctgggatccaacaaagccactacagttgataagttggactgtc
aatggccagataatgatatacaatttcatgtggatcacagctgtaatggataactcaaca
gcatttgtaattgatgactccaagatactagtcaccccactttctgtttctctgatcccc
cctcctatgtatttatttagtttaaaatttcccagtgcagttcgaaatatggctttcttt
tctcacggttctaaacataacctggccacatttttatcagatggcaggttgtgtattgta
gagcttcctgaaatagatatgtgggaggagctagaaggcactgaagtcagtgttgaggct
gcctcatgtgatattggatttggatcttttactcacctggcatggttggactcacatgta
cttcttagtgtttctcattttacctttaatcacgttaattgctcattaggaaacttttct
ggcaaggatgggctgcctgcctattacctgcaagaaattcaggtcatgtgttctgaagat
cataaacctggttctgtaacatccacaggctggcaagctaaaatttccaaccaaatttct
gttgaagaacaggtaattggaataatccctggcccactaaatagatgttcagcatatatt
cagtttgatggtggaaaaatagtccaatatttgtcgaagttagggggcaacagaatggtt
cctcttcagaaatgtgatgacatgtgtttctcatcatcatgcccatggatgactttggct
cttgctggggggttcatgtcacagaaggctttactttttggacttgatgacaatggaagg
cttcaagtcggtagaaggatattatgtgacaactgcagcagtttctcattttattcgaat
gctacagaccaatcaataacacatctgattctttcaactaaacaggatctgctatttatt
gtagacattgcggatattcaaaatgaacaactggctgttaaatatgggaatttcctacct
gctttcaagactagaactggagatgatggaagaaactatataaacatatgggaaagaggt
gctagggttataggtgtgctacatggagatgagtctgctgtcattattcaaacaattcgt
ggaaatcttgaatgtgtctacccaaggaaactgattctggcctcaatcatcaatgccttg
gtccaggggcgctttagagatgcgttatacatgatacggcgacataggatagactttaat
gttattgttgaccactgtggttggaaagcctttattcagtcagctccagaatttgtgaaa
caggtgaacaacttgagctatataactgagtttgtttgtgctatcacaaatggaaatgta
atggagacgttgtataaggattacatattgctaccttgtcaaaaggagttgaacactgta
aaatctggatatactgacgattctgatagtaacagcaagatttctgctgtcttgttggcg
ataagaaaggccctggaggagcaaatagtggaaagtccttcaagggaactttgcattttg
accacattggctcaaagccaacctccagctcttgaggaggctttgacaaggataaaattt
gtccgacaaatggagctatcaggttctgatagtccaggacggaacaattatccttctgct
gaggaatctttaaagcatctattgtggttgtctgatccagaagcagtttttgaagctgct
ttaggaatttatgatttgaacctagcagctatggttgcattaaactcacagaaggatcca
aaagaatttcttccatttcttcaagaattagaacgtatgccagctgcattaatgcaatat
aatattgaccttagactgcaaaggtatgaaaatgctttgcgacatcttgtttcagctgga
gatggttattatgaagattgcatgaggctcatgagaagttatcctcagcttttccccttg
ggtctgaaactcatcagcgatcctgttaaaaaagcacaaattcttgatgcatggggagat
catttgagttcaatgaaatcctttgaagatgctgctgtcgcttacttgtgttgttcttct
ttggaaaaagctctgaaagcttatcgctcttctggtaattggagaggagttcttacagtt
gctgggctgatcaaatctgggaaggaggaagtaatacagctggcatatgaactctgcgag
gagctccaggcacttggtaaaccaggagatgctgccacaatagccttggagtactgtggt
gatgtcaaggcaggtattgatcttttggttagtgcaagggattgggaggaggctctaagg
attgccttccttcacttgagggatgatttagtctcagaagtgaaaattgcttgtcttgaa
tgtgccaacttgctgattggtgaatatgaggagggtttagagaaagtagggaagtatgtg
gcacgctacctagctgttcgacagaggaggttattacttgctgcaaagcttcggtcagat
gagcagtcagtagctgagcttgatgatgaaactgcttcagaagtgagcagtagttttagt
ggaatgagtgcatacaccactgggacaaggaggggttcagctgcttcaatcagttcaacc
tctacgaaggggagagggcgtcagcgaaataagggaaaaattcgtgctggcagccctggt
gaggagatggctttggttgaacatttgaatggaatggctttggctactggagcaaaacat
gagattaaatctcttttaatgtcccttctgatgcttggagaggaagatcttgctaggaaa
ttgcaacgcgcttgtgaaaattttcaactgtcccaaatggcagcagtaaaattagctgaa
gatgcaatgttgactgatagcatggatgaccatgtgtattccttggagcattacatttgg
aaagtgaggaaagaagtacacaatttggaagctttttcttggcagtctagagttttggtt
tga
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