Coffea arabica (coffee): 113730592
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Entry
113730592 CDS
T11342
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113730592
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113730592
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113730592
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113730592
03036 Chromosome and associated proteins [BR:
carb03036
]
113730592
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113730592
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113730592
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113730592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
RSA-1_C
Phage_Inh_C
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
113730592
NCBI-ProteinID:
XP_027111171
UniProt:
A0A6P6WAR0
LinkDB
All DBs
Position
2e:complement(7434026..7443312)
Genome browser
AA seq
540 aa
AA seq
DB search
MELDFNSDVACLDADLLQLPEVAPLAIKDNPCVAEKLFDQWLSLPDTGSLVKSLINNAKG
GGPLNVSGTSSNTSSAASNSLPSMFPAGSTPPLSPRSSSGSPRTTKQQRAGPSVLGSPLK
LVNEPVKELIPQFYFQNGRPPPNEMKERCLFRINQFFYGHMDGLQMHEFKPVTKEICKLP
SFFSSALFRKMDLDGTGIITRDAFVDYWVNGNMLTKDIATQIFIILKQPDFRYLTQDDFK
PLLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGRLTLRELKRSNLIAAM
QHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRI
FSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNELQFF
YEEQLHRMECMAQEPVLFEDILCQMVDMISPENESYFTLRDLKGSRLSGSVFNILFNLNK
FMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagttagattttaacagtgacgtggcgtgtctcgatgccgacttgttgcagctgcca
gaggtggctcctttggctatcaaagataacccttgtgtcgccgagaagcttttcgaccaa
tggctttcgcttcctgacaccggttcattggtcaaatctttaattaataatgccaaggga
ggtggtcctttaaatgtttctggaacatcttctaacacaagttctgctgccagtaattca
ttgccttccatgtttcctgccggcagcacgcctccactttctccaagaagttcatctggt
tcccctcgaaccaccaagcaacaaagggcaggcccctctgtattgggttctcctttaaaa
ttagtgaatgaaccagttaaagagcttatacctcagttttactttcaaaacggccgtcca
cctccaaatgagatgaaagagcggtgtttgtttaggatcaatcagttcttttatggccac
atggatggattacaaatgcatgaatttaaacctgtgacaaaggaaatttgcaagctgcca
tcattcttctccagtgcacttttcagaaagatggatcttgatggtacagggatcattacc
agagatgcctttgttgactactgggtaaacggcaacatgttgacaaaagatattgctacg
cagatatttataatattgaaacagccagatttcagatacctgactcaggatgacttcaaa
cctctacttcgagaacttttggcaactcatccaggcttggagttcttacagagtacacct
gaatttcaagagagatatgctgaaactgtaatatacagaatattttactacgtgaataga
tcgggtaatggtcgtcttaccctcagggagcttaaacgttcgaacttaattgctgcaatg
caacatgctgacgaggaggaggatattaacaaggttttgaggtacttctcgtatgaacac
ttttatgtgatttattgcaagttttgggagctggacacagatcatgattttttaattgat
aaagagaaccttataagatatggcaaccatgcgcttacctacagaattgtcgataggata
ttttctcaggtgccaagaaagttcaccagcaaggttgaaggaaagatgggatacgaagat
ttcgtttatttcatattgtcagaggaggataaatcatctgaacctagtcttgaatactgg
tttaaatgcatagatttggatgggaatggggttataacaaggaatgaactgcaattcttc
tacgaggagcagttgcatagaatggaatgcatggcccaggagcctgtactttttgaggat
attttatgccagatggttgacatgataagtccagagaatgaaagctactttacattacgt
gacctgaaaggaagcaggctgtcaggcagtgtattcaatatccttttcaacctcaataag
ttcatggcatttgagacccgtgatccttttctaatccgtcaggagcgtgagaacccaaca
ttgacagagtgggatcgttttgcccaccgagaatatattaggctctcaatggaggaagat
gcggaggatgcctctaatggaagtgcagatgtttgggatgaatcgcttgaggctccattt
tga
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