Coffea arabica (coffee): 113730750
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Entry
113730750 CDS
T11342
Name
(RefSeq) protein BTR1 isoform X3
KO
K14944
RNA-binding protein Nova
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113730750
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113730750
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
113730750
NCBI-ProteinID:
XP_027111434
UniProt:
A0A6P6W830
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All DBs
Position
2e:8987377..8993572
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AA seq
319 aa
AA seq
DB search
MSMEGADSGFAASADGSQNQSPSPRKSPPSPPDHEEKTTHIKFLLSNAEAGSVIGKGGST
INDFQTQSGARIQLSRNFEFFPGTSDRIVMVSGLIDDVLKAVDLILSKLLDEFYVEEGGE
DPRFKVRLVVPNGCCGGIIGKGGSIIKSLIEDSHAGIKISPLDNSYPGLYDRLVTVNGTL
REQMRAIELILLKLAEDLHYVQSVSAPFPYPVVGYNGMNYASNGVGGKFQNARSQNKQEE
RSNSVTIGVADEHIGLVVGRGGRNIFEISQLSGARIKISERGDFMSGTSDRKVTITGSQR
AIRAAEAMISQKVSPVSER
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggaaggagcggattctggatttgctgcgtctgctgacggttcgcagaatcag
tctccttcgcctcgcaaatctcctccttctcctccagatcatgaagagaagacaactcac
attaagtttcttctgtcaaatgctgaagctgggtctgtcatagggaaaggtggctcaacc
ataaatgatttccagacgcagtctggagcacgaattcaactatcacgcaattttgaattt
tttcctgggacatccgataggattgttatggtatctggattaattgatgatgttctcaag
gcagtcgatcttatcctgtctaaattgctggatgagttttatgttgaagaaggcggagaa
gatccccgatttaaagttaggctggttgttccaaatggctgttgtggtggaataattgga
aagggaggctctattataaagtcacttattgaagattctcatgccggcatcaaaatatcc
cctctagataatagttaccctggcctatatgataggctagtaacagtaaatggcactcta
agggaacagatgcgggcgattgagttgattctgttgaagttggcagaagacctccattat
gtacaatctgtcagtgcaccatttccgtatccagtagtaggctacaatggaatgaactat
gcatcaaatggagttggagggaaatttcagaatgccaggtctcagaataagcaggaggag
aggagtaattctgtaacaattggtgttgcagatgagcatatagggttagttgttggcagg
ggtggaaggaatatttttgaaattagtcagcttagcggggcaagaattaaaatttctgaa
aggggtgatttcatgtctgggacatctgataggaaagttactatcacgggatcccaaaga
gctatccgtgcggctgaggctatgatatctcaaaaggtatcaccagtctctgagaggtga
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