Coffea arabica (coffee): 113730782
Help
Entry
113730782 CDS
T11342
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
carb Coffea arabica (coffee)
Pathway
carb04142
Lysosome biogenesis
carb04145
Phagocytosis
carb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113730782
04142 Lysosome biogenesis
113730782
04148 Efferocytosis
113730782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113730782
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113730782
Hops complex
113730782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2067
CBARP
Motif
Other DBs
NCBI-GeneID:
113730782
NCBI-ProteinID:
XP_027111503
UniProt:
A0A6P6W7V7
LinkDB
All DBs
Position
2e:9322814..9332557
Genome browser
AA seq
595 aa
AA seq
DB search
MAQIPNLDNAPINLTAIRDQSQKELLTILKNIRGKKCLAIDPKLGGSLSLIVQSSLLKEH
GAELRHLTAEPIQTDCTKVVYLVHSQLDLMKLISSQIRDDTSKGLQREYFVYFVPRRTVV
CEKILEEEKVYDLLTIGEYPLYLMPIDEDVIAFELDLAYKDHLADGDTTSLWHIAKALHK
LESTFGVIPNIRAKGKASARVADILNRMQIEEPVNASDAGMPEINTLILLDREVDMITPL
CSQLTYEGLLDEFLGVNNGAVEVDSSIMGVQQEGKKMKVPLNSTDKLFKEIRDLNFEFVV
QVLRQKATSMKQDYTEMTTTNQTVSELKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFL
GRLDMEHTIVEAESYDICFEYIEEMIHKQEPLVNVLRLLILFSITNSGLPKRNFDYLRRE
LLHSYGFEHMATLNNLEKAGLFRKQETKGNWITIKRALHLVVEDTDTANPNDISYVFSGY
APLSIRLVQHAIRSGWRPLEDVLKLLPGPHTETKRSGYVGGSYDNLSSSVLNLAKVGDGR
RSLVLVVFVGGVTFAEIAALRFLSSQEGMAYDLIIGTTKIINGQTLIEPFVEKLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattcccaatttagacaatgctcccattaatctcactgcaattagagatcag
tctcagaaagaacttcttactatcctgaaaaatattcgaggaaagaaatgtttagctatc
gatcccaagcttggtggttcgctttcattgatcgtccagagctcactactcaaggaacat
ggggctgaattgcgtcatcttactgcagaaccaattcaaactgattgcaccaaggtcgtt
tacctggtccacagccaacttgacttgatgaaattaatttcctcacaaattcgtgatgat
acttcaaagggtcttcaaagagagtattttgtttactttgttcctcgtcgtactgttgtg
tgtgagaaaatactagaggaggagaaagtttatgacttgttgactataggtgagtaccca
ttgtatctaatgccaatagatgaggatgtaatagcgtttgagctcgaccttgcttataaa
gatcatttggcggatggagacacgacctctctctggcacattgcaaaggctctccacaaa
ctagagtctacttttggagtgataccaaatattagggccaaagggaaagcatctgcacgt
gttgcagacattttgaatcgcatgcaaattgaagaacctgttaacgcatcagatgctggc
atgccagaaatcaatactctgatcctcctagacagagaggtagacatgatcactcctttg
tgttctcagttaacatacgaggggctgctggatgagtttcttggtgtcaataatggtgca
gtggaagtagactcatctattatgggtgttcagcaagaaggaaaaaaaatgaaggttccc
cttaattcaactgacaaactgttcaaagagatacgggacttaaacttcgaatttgttgtc
caggttctacgtcaaaaagcaacatccatgaaacaggactacacagagatgacaactact
aatcaaacagtatctgaattgaaggactttgtgaaaaagctgaactcgttgcctgaaatt
actcggcacataaatcttgctcagcacttgtcaacttttacatcaaaaccttcatttctt
gggcgtcttgatatggaacatacaattgttgaggctgagagctatgacatatgcttcgag
tacattgaagagatgatccacaagcaggagcctctagttaatgttctgcgtctcctgatc
ttgttttcaataacaaattcaggactgcccaaaaggaattttgactatttgaggagagag
ttgcttcacagctatggttttgagcacatggcaactctgaataatttggaaaaagctggt
ttgttcaggaagcaggagacaaaaggcaactggattacgatcaaacgcgctttgcatctt
gtggttgaggatactgatacagctaatcccaatgatatctcctatgtcttctctggatat
gcacctctcagtattcgccttgttcagcatgcaatccgatctggatggcgccctcttgaa
gatgtactgaagttactgccaggaccacatacagaaaccaagagaagtggatatgttggc
ggttcatatgacaatctttccagttctgtgctcaacttagccaaagttggagatggaagg
cgctctttggtccttgttgttttcgttggaggggttacgtttgcagaaatcgctgctctt
cgtttcctcagctctcaggagggaatggcatatgacttaataataggaaccacgaagatc
atcaatggtcaaacgttaattgaaccatttgttgagaaattgggataa
DBGET
integrated database retrieval system
