Coffea arabica (coffee): 113730789
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Entry
113730789 CDS
T11342
Name
(RefSeq) pumilio homolog 4
KO
K17943
pumilio RNA-binding family
Organism
carb Coffea arabica (coffee)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
PUF_NOP9
COG5_C
Motif
Other DBs
NCBI-GeneID:
113730789
NCBI-ProteinID:
XP_027111512
UniProt:
A0A6P6WBM9
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Position
2e:9401792..9415572
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AA seq
979 aa
AA seq
DB search
MVDEGGKDDCLLSSGRLMSDSGDDLMLGGSSCNGDLMNNSSILESELELLLLQKEQQRQR
NRDLFVGSARDFDIHRSGSAPPSVEGALSAAGSLSRNPNFASLHSTASNTGTDRVLTEEE
IRSHPAYLAYYYSNENLNPRLPPPLLSKEDWRIAQRVQAAGSSVDGTGDLTNNLLVDDGV
SSLLLSMQPRLAVKKAEEDLIELRKAAVRNLSRKSSTEYLEGSSSSSVGLSKAGMGARRK
SFADIVQEGCGQPATSSGRLSRSASRNSVGDILDSRTISDTYSGVLQNRAESFDSMHRGQ
LTAGLSRDLGHPSAYPCTTGASLTSPPGFPAVGSRVSLDAKKNIRDPKSQDLSSHDTEIY
HILASFPGLTVNKVSEDAPLSSPTPNCHQLNMQQHFIDKSRAEKLIPATNHNEFSRGKMV
SQLDYGNFNLDRQVNLPRRASSLVNLQSLVNSSEFTMLDNPNLQYPGSHLGNVTLNGQSL
RRSGNLGLSNIHSPDIHQAHYSEKQLNYATHAAAMPRNLSHTRNYTSTSHPDLHQLERIY
IETLLAQQNQHCQLPLLSKSGSLNLQYHGIPTFGLHMSHQGNRMPNAIHPTVESGGPTFQ
NEQPSQFTIALKSQLGGASGTRIEGKTISPLLEELKSNKGRSLELSDVLDHVVEFSMDQY
GSRFIQQKLETACTEDKITIFPKIIPHARSLMTDVFGNYVIQKFFEHGTETQRKELADQL
VGHVLGLSLQMYGCRVIQKALEVVDVEQQTRMVTELNGSVMKCVRDQNGNHVIQKCIECV
PQDRIQFIISSFFGQVVALSTHPYGCRVIQRVLEHCNDPNTQHFIIDEIMNSICTLAQDQ
YGNYVIQHVLQHGNPRERSEVISKLAGQIVKMSQQKFASNVIEKCLAFGGPQERKVLIDE
MLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSRGLIVSRIKVHLNALKKYTYGKHIV
SRVEKLIATGEKHMAVSSS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgagggtgggaaagatgactgcttgctgtcaagtgggagactaatgagtgat
tctggtgatgatctaatgttgggaggatcaagttgtaatggggatttaatgaacaatagt
agtattctggaaagtgaacttgaattattgctgctacagaaagagcagcagaggcagcga
aatcgcgacttatttgttggaagtgcgagggattttgacattcacaggagtggtagtgct
ccaccaagtgtagaaggggccctgagtgctgctggaagtctatccaggaatcccaatttt
gcatcgcttcatagtactgcttctaatactggtactgatagagttttgacagaagaagag
attaggtctcaccctgcatatttagcatattattattcaaatgagaatcttaatccgagg
ttgcctccaccattgttatcgaaagaagattggcggattgctcagagggttcaggcagcg
gggtcttcagttgatgggactggggacttgacgaacaacctcttggttgacgatggtgtc
agctcattgttgctgtcaatgcagcctaggctagctgtcaagaaggcggaagaggatttg
attgaattaagaaaggctgcagtgaggaacctttcacggaaaagctccacagaatatctg
gaagggagctcttctagttctgttggcctatcaaaagctggaatgggtgcgagaaggaag
agttttgcagatatagttcaggaaggatgtggtcaacctgcaacatcctcaggtcgtctt
tcacggtctgctagccgtaactcagttggtgatatcttggattcgagaactatatctgat
acctattctggagtattgcaaaatagagcagaatcttttgattcaatgcatcgtgggcaa
cttactgcaggcttgtccagggatttaggccaccccagtgcttatccatgtacaacaggt
gcatctttgacatctcctccagggttccctgctgtgggtagccgagtctcccttgatgcc
aagaaaaacatcagggatccaaaatcacaggacctttcatctcatgacactgaaatttat
catattttagcttctttcccaggattaactgtcaataaagtcagcgaggatgctccttta
agttctccgactccaaattgtcatcagctgaatatgcagcagcacttcattgacaagtcc
agagctgaaaaattgatccccgctaccaatcataatgaattttccagggggaagatggta
tcacagctagattacgggaactttaatttagacagacaagtaaatcttccaagaagagcc
tcttctttagtcaaccttcagtcactagtaaattcttctgagttcacaatgttggacaac
cctaatctccaatatccaggttcacatttgggtaatgttactctgaatggacaaagcttg
aggaggagtggtaatttgggtctctctaacattcattctccagacatacatcaggctcat
tattcagagaaacagttgaactatgctacacatgcagcggctatgccaagaaatctgtct
cacacaagaaattacacaagcacttctcaccctgatttgcaccaattagagagaatatat
attgaaacattgctcgcacaacagaatcaacattgtcagttgcccctcttatctaaatct
ggaagtttgaatctccagtaccacgggatccctacatttggcctacacatgtctcatcaa
ggaaacagaatgccaaatgccattcatcctacagtggaatctggaggtcctacttttcaa
aatgagcaaccttcacagtttactattgcattgaaaagtcaactggggggagctagtggg
actagaatagaagggaagaccatatcaccattgttagaagagctcaagagcaacaagggc
agatctttggaactttcagatgttcttgatcatgttgttgaattcagtatggatcagtat
gggagtcgctttattcagcagaagctggaaactgcctgtactgaggataagattacaata
tttccaaagatcattcctcatgctcgaagtctgatgactgatgtctttggtaattatgtc
atacagaagttctttgagcatggcacagaaactcaaagaaaagagttggctgatcaactt
gttggtcatgttttaggcctcagtcttcaaatgtacggttgcagagtaattcagaaggcc
ttggaagtggttgatgtggagcagcagacacgaatggtgacagagcttaatggttctgtt
atgaaatgtgtccgtgaccagaatggtaatcatgtaatccagaaatgtattgagtgtgtc
ccacaagatcggatccaatttattatctcatccttttttggacaagttgttgccttgtct
acccatccttatggttgccgtgtcattcagagggtcctggaacactgcaatgatccaaat
actcaacatttcatcattgatgaaataatgaattctatatgtacgttagcgcaagaccaa
tatggaaattatgtcatccagcacgtcttgcaacatgggaatccccgcgaacggtctgaa
gtcattagcaagctcgctggacaaattgtgaagatgagtcagcagaaatttgcttccaat
gtcattgagaagtgcttagcttttggtggtccacaagagcgtaaagttctgatagatgag
atgcttggttccaccgatgaaaatgaaccgctgcaggctatgatgaaagatccctttgga
aactatgttgtccagaaggtgctcgagacttgtgatgatcaaagccgcgggctaattgtc
tctcgtattaaggtgcacttgaatgcgttaaagaaatacacttacgggaagcatattgtt
tctcgtgttgagaagctcatagcaactggagagaagcatatggcagtatcctcttcttga
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