KEGG   Coffea arabica (coffee): 113730808
Entry
113730808         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113730808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:carb03021]
    113730808
Transcription machinery [BR:carb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     113730808
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95 WHD_UBR1
Other DBs
NCBI-GeneID: 113730808
NCBI-ProteinID: XP_027111543
UniProt: A0A6P6W7Z8
LinkDB
Position
2e:9769690..9774419
AA seq 301 aa
MAEKTTIAPNSTTNSYTCIENSNNNGVMRNGQLETSKAERHVWLMKCPPLVSRSLNQHHP
HPHDYSSSSSSSTTSSSLSFSSSSDGPIAKVVVAVDPLLPNDDFSSTQFTMELAGAESGN
IPKCYSMDMSTDFIPMSVFSESAQGKVSVEGKIYHKFDMKPHGKTIEDYGKLCRERTTKY
MTKTRQIQVIDDDSGQHLRPMPGLFGLKASGPQEKRKMPVKSSELKRTRRDRNEMEEIMF
KLFERQPNWTLKQLVQETDQPEQFLKDMLKLLCVYNNKGSNQGTYELKPEYKKSEDEPNS
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcggagaaaaccaccatcgcccctaactccaccaccaacagttatacttgcattgaa
aacagcaacaataacggggttatgaggaatgggcagttggagacgagcaaagcggagaga
cacgtctggctaatgaaatgccctcccctcgtttctcgttctttgaaccaacatcatcct
catcctcatgactactcttcttcttcttcctcttctaccacttcgtcatcgttgtcattt
tcgtcttcttctgatgggcctattgctaaagtcgtcgtcgccgtcgaccctttactcccc
aacgacgacttctcttctactcagttcactatggaattggctggcgcggaatctggaaac
attcccaagtgctattccatggacatgtcaacggattttattccaatgtctgtattctcc
gagtcagctcaaggaaaggtttctgtggaagggaaaatctatcacaaatttgacatgaag
cctcacggtaaaaccattgaggactatggaaaattatgccgtgagaggacaaccaaatac
atgacaaaaactagacagatacaggttattgacgatgatagtggtcagcatttaaggcct
atgcctggattgtttggtctaaaggcttcaggacctcaagagaagaggaaaatgccagtt
aagagttcagagttgaaaagaacaagaagggaccgtaatgaaatggaagagatcatgttc
aagctctttgaaaggcaaccaaattggacactaaaacaacttgttcaggaaacagaccaa
ccagagcaatttctgaaagacatgcttaaacttctctgcgtatataataacaagggatca
aatcaaggcacttatgagctgaagcccgagtacaagaaatctgaagatgagccgaactcc
aagtag

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