Coffea arabica (coffee): 113730900
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Entry
113730900 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113730900
03400 DNA repair and recombination proteins [BR:
carb03400
]
113730900
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
113730900
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113730900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113730900
NCBI-ProteinID:
XP_071934987
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Position
2e:complement(10698971..10704329)
Genome browser
AA seq
726 aa
AA seq
DB search
MASSAKRPQPIEEGYGAPWRDAKKGKIEAEEQASADYHPALPVRRVLLNPADCDIDFNIE
EDGLRGSALYEEGFAYCWSGARANVGITGGKYCFGCKIIAHQPVDMDDTPLDQQHICRVG
ISRGDDVVGNLGETLHSFGFGGTGMFSNAGKYSGYGEQFDDGDTIICCVNLESKPMASIG
FSKNGKWLGTAIQFHAGFGGLEVVNCPIKNLQWESALFPHVLLKNVEVQMQFRTEDGLVP
QEGYKPWASAIEDRKVILGPTFQNVSDCELIMMVGLPAAGKSTWAENLVRAHPEKRYILL
GTNLVLDQMKVPGLLRRHNYGERFDRLMQRATAIFNTLMSRASKVPRNFIIDQTNVYKNA
RKRKLKPFLNYRKIAVVVFPRPEELNNRSDKRNKEMGKEIPAQAVNEMLANYTLPMSKDM
PNTDEYFDEVFFPELSRAESQRYLDQMKANLNASVVVSSHSDGMGFAGPWSNNAYSPYPP
VGTPAGSNSYLCHGGYSHSGGSDCGNRFAASLDVNEPYRSYGAGYTSIAIDNNRMHMTEP
YASLATVPFNSQDVYASQPRGSSHEMSIPSFGAPLRNKGSLPVGTPAGSNSYSYPINRLE
SYGSHGGYSHSGGSDGENRFAAPVNGNELYMSYGAGYTCSAADNNRMHMTETYASLTTVP
FNSQVVYASQPQRSSQELLGTGPPTFGSTTAGPYGSPYGAPVPRPSYGNFPPGKEHHGGY
GPPGPW
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatctgcaaagcgtcctcagccgatcgaagagggttacggggcgccgtggagg
gatgccaagaaagggaaaattgaagcagaagaacaagcctctgctgattatcatccggcg
ctgccggttcgtcgcgtcctcctcaatccggccgattgtgatatcgatttcaatattgaa
gaagatggtctgcgtggttcagcactttatgaggagggatttgcttattgctggtctggt
gcccgggccaacgtgggaatcactgggggaaagtattgctttgggtgcaaaattattgca
catcagccagttgatatggatgacactccactggaccagcagcatatatgtagggttggc
atctcaaggggagatgatgttgttggaaatcttggggagaccctacacagttttggtttt
gggggcacaggaatgttttctaatgcaggaaaatattcaggttatggagagcagtttgat
gatggtgacactataatttgctgtgtcaaccttgaaagtaaacccatggcttcaattggt
ttctcaaagaatgggaagtggctgggaactgcaattcagtttcatgcaggttttggtggc
ctcgaagtggttaattgtccaatcaaaaacttgcaatgggaatcagcactatttcctcat
gttttgctaaaaaatgttgaagttcagatgcaattcaggactgaagatggattagttcca
caagaaggctacaaaccgtgggcctctgcaattgaggatcggaaggtgatattgggacct
acgtttcagaatgtaagtgattgtgaactaataatgatggttggattacctgctgctggc
aagtctacgtgggctgagaatttggtcagggctcatccagaaaagcgatatattctgctt
ggaaccaatttagtcctggatcagatgaaggtgcctggtctgcttcgtagacataactat
ggtgaacgatttgatcgtctgatgcaacgagcaactgcgattttcaatactcttatgtcc
agagcttccaaggtgcctcgcaatttcataatcgaccaaacaaatgtctacaagaatgca
cgtaaacgcaagctgaagccatttttgaactaccgtaagattgccgttgttgtttttccg
agaccggaagagctcaataatcgttcagataaaaggaacaaagaaatgggaaaagaaatt
cctgctcaagctgtaaatgagatgttagccaattatactttgccaatgagcaaggacatg
cccaatacagatgagtattttgatgaggtttttttcccagagctcagccgagcagagtcg
cagagatatttagatcagatgaaagcaaatctcaatgcgagtgtggtggtttcctctcat
tctgatggcatgggctttgctggaccttggtctaataatgcatattcgccttatcctcct
gttggaacacctgctggaagtaactcatatttgtgtcatggagggtattctcattctggt
ggaagtgattgtggaaatagatttgctgcttctctggatgtgaatgagccttacaggagc
tatggagcaggatatacgtccattgctattgataataacagaatgcacatgactgaaccc
tatgcaagtttggctacagttccattcaactctcaagatgtgtatgctagtcagccacga
ggaagttctcatgaaatgtctattccttcatttggagcccccctgcgaaataaaggaagt
ttacctgttggaacccctgctggaagtaactcttattcgtatccaattaatagacttgaa
agctatggcagtcatggagggtattctcactctggtggaagtgatggtgaaaatagattt
gctgctcctgtgaatgggaatgagctttatatgagctatggagcaggatatacgtgcagt
gctgctgataataacagaatgcacatgactgaaacctatgcaagtttgactacagttccg
tttaactctcaagttgtatatgctagtcagccacaacgttcatcacaggagctcttgggt
acaggaccacctacatttgggtctactacagcaggaccatacggttctccatatggagct
cctgttccaaggccttcatatggaaacttcccccccggtaaagagcatcatggaggttat
ggccccccaggcccatggtag
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