Coffea arabica (coffee): 113731066
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Entry
113731066 CDS
T11342
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113731066
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113731066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
GDH_C
DUF5817
Motif
Other DBs
NCBI-GeneID:
113731066
NCBI-ProteinID:
XP_027111914
UniProt:
A0A6P6WA55
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Position
2e:13374980..13377272
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AA seq
524 aa
AA seq
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MESSGSCKNCSKRTLVVDGDTGNLVCSSCGVVQDFENFQAHIGGITGPAGTFVRVGTAGS
GSVYSYKQTKVYQAQKLIEDLIFKLGLAASRYDEVKAMVERITEGEYGQGRWFPIFVGAC
AYVVMRKDKKSLPVVEVANVVGCDISELGRMVHRVVDFLDLKLPEFDIVSSFERAIRSCP
SFSGVEEEIVGRMLKQGVFLVQCSMKWYLTTGRRPMPIVAAILVFVAELNQVHVKIEEVA
KELYVAVRTCKKRYKELLERLVKVAQLLPWGKDVTVKNIIRNASSVIQYMELKSSSRCGG
KNRFDHVGFDLDDLVADCLNKEIGYRYDTCDVEKDLQYFEVENSPTLRTEGTNNLQISHE
CLAMIYSNFLDHLPLIKSSAEIEEADWTKQEKGYDIYTCREWWTGKSEMSKKLLLKQIIE
KDVGLNANPPSFDRGNLTYQRRREKINAAKSRIQRILHPSEAGFGDGKDLCLAQCISASN
KRKIQVDVDWEDLIIETLLLHQVREEEIEKGYYNALLDLHVFNL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagagttctggatcctgcaagaattgcagcaagagaaccctcgtagtagatggtgat
actggcaacttggtgtgttcatcatgtggggttgttcaggattttgagaattttcaagcc
cacattggcggtattactggtcctgctggcacctttgtccgcgtaggcacggcgggctcc
ggtagtgtgtatagctacaagcaaactaaagtttatcaagctcaaaaactgatagaagat
ttgatatttaagttaggattagcggcctcgcggtatgatgaagttaaggccatggttgag
aggataacagagggtgaatatggtcaggggagatggtttccaatttttgttggggcttgt
gcttatgttgtaatgaggaaggataagaaaagcttgccggttgttgaagtggcgaatgtg
gtcggttgtgatattagtgagttgggaagaatggtgcatcgggttgtggattttcttgat
ctgaagttgcctgagtttgatattgttagctcgtttgaacgtgcaattaggagttgtccg
agctttagtggggttgaggaggaaattgttggaaggatgttgaagcaaggggtgttcttg
gtgcagtgctcgatgaagtggtatttgactacagggagaagaccaatgcccattgtggct
gccattttggtgtttgttgcagagttgaatcaggttcacgtaaagattgaagaggttgca
aaggagttgtatgtggcagtgcgaacgtgtaagaagaggtataaggagctgttggaaaga
cttgtaaaagttgcacaactcttaccttgggggaaagatgttactgtcaagaatattatc
aggaatgcttcttcagtaattcagtacatggagttgaagtcgtcatcaaggtgcggtgga
aagaatcgttttgatcatgtcggttttgatttggatgatttagtcgctgactgtttgaac
aaagaaatcgggtacaggtatgatacttgtgatgtggaaaaggacttgcagtattttgag
gtggagaattctccaactttgagaacagaaggaacaaataatctccagatttcgcatgaa
tgcttggccatgatttattcaaatttcttagatcacttaccattgattaagtcttctgca
gaaatagaagaggcagattggacaaaacaggagaagggatatgacatttacacttgtaga
gagtggtggacaggcaaatcagaaatgagcaagaaacttttgctgaagcaaattattgag
aaagatgttggattgaatgcaaaccctccgtcttttgatagaggaaacttgacatatcaa
aggaggagagaaaagataaatgctgctaaatcacgcattcagaggattttgcatccatct
gaagctggctttggtgatggaaaggatctatgtcttgcacaatgtataagtgctagcaat
aaaaggaaaatacaagttgatgttgactgggaagatttgattatcgaaacacttctcctt
catcaagtgagagaggaggagatagagaaggggtattacaatgccttgttggacttgcat
gtatttaatctctga
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