KEGG   Coffea arabica (coffee): 113731196
Entry
113731196         CDS       T11342                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B'' 2 isoform X1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113731196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113731196
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113731196
 Complex B
    113731196
 Complex C
   U2 SnRNP specific factors
    113731196
SSDB
Motif
Pfam: RRM_1 RRM_5 xRRM DUF4523 DUF6445 RRM_YTH1
Other DBs
NCBI-GeneID: 113731196
NCBI-ProteinID: XP_027112115
UniProt: A0A6P6WAR2
LinkDB
Position
1c:complement(55752252..55755820)
AA seq 231 aa
MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS
EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIARAEGTYDKKKKQEEKAERKRRVEEA
QQNATPNGPRAESNGGPAASSRPGRPSAQEAVADPNNILFIQNLPYETTSMMLDVLFKQY
PGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgctgaccggagatatacccccaaatcaaaccatttacattaagaacctcaacgagaag
gttaaaaaagaagagttgaagagatctctgtatgcattgttttcgcagtatgggaggatc
ctggacattgttgccttgaaaacaaccaaacttcgagggcaggcttgggttgtatttagt
gaagtgaccgctgccagcaacgcagtgcgccagatgcaaaattttccgttttacgataag
cctatgcggatccagtatgcaaaatcaaaatcagattgtattgctagagccgagggtact
tatgacaagaaaaagaagcaagaagagaaagctgaaagaaagagacgtgttgaagaagct
caacaaaatgctactcctaatggtccaagagctgagagcaatggtggcccagctgcttcc
tctcgtccaggacggccgagtgctcaagaagccgttgctgatccgaacaacatactcttc
atacagaatctaccatacgagacaacaagcatgatgctggatgtccttttcaaacaatac
cctggttttagggaagttcgaatgattgaggcaaaaccaggtatagccttcgtagaattt
gaagatgatatacaatcttcagttgccatgcaggcacttcagggcttcaaaattaccccc
cagaatcctatggcaatcagctatgcgaaaaaatga

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