KEGG   Coffea arabica (coffee): 113731200
Entry
113731200         CDS       T11342                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:carb03016]
    113731200
Enzymes [BR:carb01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     113731200
Transfer RNA biogenesis [BR:carb03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    113731200
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_PARP12 zf-CCCH_9
Other DBs
NCBI-GeneID: 113731200
NCBI-ProteinID: XP_027112118
UniProt: A0A6P6W9J5
LinkDB
Position
2e:complement(15829708..15833948)
AA seq 698 aa
MDGSAAEASILEQPSFRENPQNSKPDDDASAPTAAPAPAPLTPEELVAKARAPVKKEFLR
PPPIRTSNSTTSQPHDAATEPNSTPLIKEKKSKRQLKRERRQELKSALHLCPEVAKSGDV
GSCCYGEKCRFSHDVEAFNAQKPADLKGSCPFLKIDQGLCHYGLACRFSGTHRANGVVAA
GTLRNEVNSLNKDVQKLLWKNKMRFPKADATLKLLGLSGKIKKLVDTEDNQVATNGSAEE
NAKKDSAEIGSVSDVNCCSELLEEDKPEDADATEDIRPVKKAKSSCDESYGSTEVNAGYG
VHGKEDISSKPNGSKSVDIADTVTVESDKILKLHPREKKLIDFREKLYLAPLTTVGNLPF
RRVCKLLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVSRTVEL
IEQECSVDFIDLNMGCPIDIVVNKGAGSALLTKPMRMKSVIQAASGTVDTPITIKVRTGY
FEGRNRIDSVIEDIGNWGASAVTIHGRSRQQRYSKLADWEYIYQCAQKAPDSLQVLGNGD
VFSYLDWNKHKFDCPQLSACMVARGALIKPWIFTEIKEQRHWDISSAERLDIFKDYVHFG
LQHWGSDSKGVETTRHFLLEWLSYSCRYIPVGLLDVIPQKINWRPPSYYGRDDLETLMAS
DSAADWIRISEMLLGKVPAGFTFSPKHKSNAYDSAENG
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggacgggtctgcagctgaggccagtattctggagcaaccctcattccgggagaatccc
caaaactcaaaacctgatgatgatgcttcagctccaaccgcggctccggctccggctccg
ctcaccccagaagagttagtagctaaagccagagctccagttaagaaagagttccttcgc
ccaccaccaatcagaacatccaactccaccacgtcccaacctcacgacgccgcaacggag
cccaactccactcctcttatcaaagagaaaaaatccaaacgccagctcaaacgtgaacgc
cgccaagaattaaaatctgcattgcacttgtgtccggaggttgccaagagcggggatgtg
ggttcttgttgttacggtgaaaagtgccggtttagccatgatgtggaggcgttcaatgct
cagaagccggctgatttgaagggcagttgcccctttttgaagattgatcaaggactttgt
cattatgggctggcttgtagattctccggcactcatagagctaatggtgttgttgctgct
gggactctgaggaatgaagttaattcgttgaataaggatgtccaaaagcttctctggaag
aataagatgaggttccccaaagctgacgctaccctaaagcttcttggcctttcaggtaaa
ataaaaaaattggtggacaccgaggacaatcaagttgctacaaatggctctgctgaggaa
aatgctaaaaaagattctgctgaaattggttctgttagtgatgtgaattgctgttctgaa
ttgctggaagaggataagccagaggatgctgatgcaactgaagatatacgacctgtcaag
aaggcaaaatcttcatgtgatgaatcttatggctccactgaagtaaatgctggttatggt
gtgcatgggaaggaggatattagctccaaaccaaatggatcaaaatcagttgatattgct
gatactgttactgtagagtctgataaaatcctaaaattacacccacgtgagaaaaagctc
attgacttcagagaaaagctttatcttgcacctctgactactgtggggaatctacctttc
cgaagggtttgcaaattgcttggagctgatgtgacatgtggcgagatggcaatgtgcact
aatcttttgcaggggcaagcttcagaatgggcactactgaggcgtcattcgtctgaggac
ctctttggtgttcagatttgtggagcatatcctgatacagtttcaagaactgttgaactc
atagagcaggaatgctcggtggattttattgatcttaatatgggatgtcccattgatatt
gttgttaacaagggcgctggatccgctcttcttacaaaaccaatgcgaatgaagagtgtc
atacaagcagcttctggaacagttgataccccaataaccatcaaggtgcgaactggctat
tttgagggcagaaatcgcattgattctgtgattgaagatattggaaattggggagcaagt
gcagtgactatacatggtcgttcgcgtcagcaacgttacagcaagcttgctgattgggag
tacatataccagtgtgcgcaaaaggccccagattcattgcaagtccttggaaatggggat
gtgttctcctatttagactggaataagcacaagtttgattgtcctcagctttctgcttgt
atggttgctcgaggagccctaattaagccctggatttttactgaaataaaggaacagaga
cattgggatattagttctgctgaacgtcttgatattttcaaggattatgtgcattttggc
cttcaacactggggatctgattccaaaggtgtggaaacaactaggcatttcttgttggaa
tggctaagttactcttgtaggtatataccggttggtctcttagatgtgatcccccaaaaa
ataaactggcggcctccctcgtactatggtcgggatgacttggaaacactgatggcttct
gattcagctgcagattggattagaatctctgagatgttacttggcaaggtcccagctgga
tttacgttctcaccgaagcacaagtccaatgcctatgacagcgctgaaaatggctaa

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