Coffea arabica (coffee): 113731241
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Entry
113731241 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14573
nucleolar protein 4
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113731241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113731241
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113731241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_10
RRM_7
Whi3-like_N
RRM_Rrp7
DUF8489
MIC5
Motif
Other DBs
NCBI-GeneID:
113731241
NCBI-ProteinID:
XP_027112191
UniProt:
A0A6P6WC47
LinkDB
All DBs
Position
2e
Genome browser
AA seq
978 aa
AA seq
DB search
MGKKKKVKATDGDSQYSPSTVFVTGLPYSLTNAQLEESFSEVGPIRRCFMVTKKGSSVHR
GFGFVQFAAVEHANRAIELKNGSTVGGRKIQVKHAMHRASLEQRRSKGNQAEISDGVAQA
KDNKLSLSAKTVEHEEFSKSLSTVNETLESLEKRKAATTSSSIADEETSLEKEKQRVAKT
VIFGGLLNTAMAEDVHRLARECGTVRSIIYPFPKEELEHHGLARDGCKMDASSVLYTSVK
SARSSVAALHQKKIHGELLWARQLGGEGSKTQKWKLIVRNLPFKATVNEIKNMFSAVAFV
WDVFIPQNPETGLSKGFAFIKFTSKQDAENIIKMFNGKNFGKRPIAVDWAVSKKVYASGG
KSLDAGEEGQDKRGEESDSDGDLDEDDTEVNEKSLQDYKVDGMSDGSDSTEEKVSDSETN
FDEEADITRKVLQNLISSTSKATDSLDNDNSGLSKEMKDDESLGISSKLSDTFIAPNTIP
GNSGKNKQIEKNPTERDNELQRTIFISNLPFDTSSEEVKQRLLAFGEVESFLPVLHHVTK
RPRGTGFLKFKTSDGADAAVSAANAAAGLGIFLKGRQLKILKALDKKAAQDKVSEKTKKE
DRDHRNLYLAKEGLILEGTPAAEGVSVSDMSKRKMLQEKKMTKLKSPNFHLSRTRLAMYN
LPKTMSEEELKQLCIHAVTSRATKQKPVIRQIKILRESKNTNSTRKNSSRGVAFVEFSEH
QHALVALRVLNNNPETFGPEQRPIVEFAVDNVLTLRSRKDKLQARQQDSLNGVQDLQQND
KSSALDYHSKEKSRKRKSRHDAKASDTSGSKTEAEVGSKTEAEVGRQVFAESPSGEVRVV
KKEKGDAGGKRDNISLKKKMRGSKNKQIPHQEQRNPDGGVPHPAEGTTISAHKRGHQERA
QSYTKKRRLQNQAQKHEEPVGPEIRKKSKRNSDPLGRDVVDKLDTLIEQYRSKFARRDAD
QTDHEKRGSKQIRRWFQS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagaagaaggtgaaggcaactgatggcgacagccaatacagcccttccacc
gtcttcgtcaccggcttgccctattctttgactaatgctcagttagaagagagctttagt
gaagttggaccaataagacgctgctttatggttacgaagaaggggtctagtgtgcaccgg
ggctttggctttgttcaattcgctgcagttgaacatgctaatcgtgctattgagctgaaa
aatgggtccactgttgggggtagaaagattcaagttaagcatgctatgcatcgtgcttct
ctggaacaacgccgatcgaaaggaaatcaagcagaaatttctgatggtgttgcccaggca
aaagataacaagttaagtttgtctgccaagacagtcgagcacgaggagttttcaaaatct
ctatcaacagtgaatgaaacacttgagtccttggagaaaagaaaagcagctacaacttct
agcagtatagctgatgaagaaacttctttagaaaaagaaaagcagagagttgcaaagaca
gtcatatttggtggtcttcttaatactgctatggcagaagatgttcaccgtcttgccaga
gagtgtggcacagtacgttctattatttatcctttccccaaagaggagcttgagcatcat
ggtctagctcgagatggatgtaaaatggatgcttcatctgtcctttatacaagtgttaaa
tcagctcgttcctctgttgcagcattacaccaaaaaaagatacatggtgaacttctatgg
gcacgtcagcttggtggagagggctcgaagacccaaaagtggaagcttatagtgcggaat
ctcccattcaaggcaacagtgaatgagataaagaacatgttttcggctgtggctttcgtg
tgggacgtttttattcctcaaaatcctgagacagggttgtcgaagggatttgcttttatt
aaattcacatcaaagcaggatgcagaaaatattatcaagatgttcaatgggaaaaatttt
ggtaaaagaccaatagctgttgattgggctgtttcgaaaaaagtttatgcctctggtggt
aaatctcttgatgctggtgaagaagggcaggacaaacgtggtgaggaaagtgatagtgat
ggtgatttggatgaggatgatacagaagtcaatgagaaatccctacaagattacaaagtt
gatggtatgtcagatgggtctgattcaactgaagagaaggtctctgacagtgaaacaaac
ttcgatgaagaagcagatattacaagaaaagttctccagaacctaatttcatcgacgtct
aaagcgacagatagcttggataatgataactctgggctgtccaaagaaatgaaggatgat
gaaagtttgggcatatcaagcaaattgtctgatacttttattgcaccaaacacaatacca
ggaaattctgggaaaaacaaacaaatagagaaaaacccaactgagagggacaatgaactg
caaaggacaatattcattagcaaccttccttttgatacgagtagcgaagaagtaaaacaa
cggctcttggcatttggtgaagtagaatcctttcttccagttcttcatcatgttaccaag
cgaccgaggggaacaggatttctcaaatttaaaacatcagatggtgctgatgctgcagtt
tcagctgccaatgctgctgctggtttgggtatctttctaaagggtaggcaattaaaaatt
ttgaaggctctggacaagaaggcagctcaagataaggtttcggagaagaccaaaaaagag
gatcgtgaccaccgcaatctttacctggcaaaggaaggtcttatcctcgagggaactcca
gctgctgaaggtgtttcagtgagcgatatgtcaaagcgcaaaatgttgcaggagaaaaaa
atgactaaacttaaatctccaaacttccatctgtcaaggacaaggctggcgatgtacaat
ttgccaaagacaatgtctgaggaagagttgaagcaactctgcatacatgcagtaacttct
cgagctactaagcaaaagcctgttattcgacagataaaaattttgagggagtccaagaat
acaaactcaaccagaaaaaatagttctcgtggagtggcttttgtcgagttttcggagcat
caacatgcacttgtggctttgagagttcttaacaataatccagaaacttttggtcctgag
caacgcccaattgtcgagtttgctgttgataatgtcctaacactgcgaagcaggaaagac
aagcttcaagctcggcagcaggattccttgaatggcgttcaagatttgcagcagaatgac
aaatcaagtgcattggattatcattcaaaagagaaatcaagaaaacgcaaatctagacat
gatgctaaagcatcagacacttctgggagtaagacagaagctgaagttgggagtaagaca
gaagctgaagttgggaggcaagtttttgcagagtctccttcaggggaagttcgagttgtt
aagaaggaaaaaggtgatgctggtggcaaaagggacaacatttcattgaagaaaaagatg
agaggctcaaaaaataagcaaataccccaccaggaacaaagaaaccctgatggaggcgtg
ccacatccagctgaaggcacaaccattagtgctcataagcgtggacatcaggaaagagca
cagtcatataccaaaaagaggaggcttcagaatcaagcacaaaaacacgaggaacccgtt
ggtcctgagataagaaaaaagagtaaaaggaacagtgaccctctgggacgagatgtggtg
gataaacttgacacactaattgagcagtacagatccaaatttgcacggcgcgatgcggac
caaactgaccatgaaaagcgaggttccaaacagatcaggaggtggttccaatcgtga
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