Coffea arabica (coffee): 113731546
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Entry
113731546 CDS
T11342
Name
(RefSeq) F-box protein SKIP22-like
KO
K10293
F-box protein 7
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113731546
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113731546
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Csa5_I-A
Motif
Other DBs
NCBI-GeneID:
113731546
NCBI-ProteinID:
XP_027112669
UniProt:
A0A6P6WBQ6
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Position
2e:18456607..18458647
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AA seq
531 aa
AA seq
DB search
MMKLRIRSFGTKETLRIEVPIPCSLQQLKDIISQTLRPSTSSSPSAPSDSIHLSLNRKEE
IQSSSPNEDTLQSLGITSGDLIFYTLDPSRFSSSESLIPNSQEPISSPLVQNSEFPLRID
LTLDSGKPLQKPSSMEPLDPPKITNSDPSSQLKQAHQPESANLNEQNEGSTDYMEFDGID
DQEEGDDASALEAVGNGKSFSVPGFLRKVFTEELGGGDDDGSRNHKLLVIAIHAVLLESG
FVGFDMNLKTESKGFPFRNDWPSSGFRLSLFYTLPEIVSDVSPGLDCHNCVVGLKFQNVG
KFMMVYGSLNAGSAMHSVRLNEDELVSFLNVVWANCGLGDDIMISGDVVLGASPENEVFK
FWRNVKDNLALPLLIDLCESVGLVLPPCFMRLPTDLKLKILESLPGADIAKVSCVSAELR
YLASSDDLWKQKCVEQFGHACKTEDKGPWKEKFARFWESRKRRKLGSRSLFRRPLHPRRI
LDPIPRFPHWPGIIGGDYDLYPQIPGGARLRDLGHCSRSHVPRCQFGRNRI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactcaggattagatcattcggaaccaaagaaacgctaagaattgaggttccc
atcccatgttctcttcaacaactcaaagacatcatctctcaaacacttaggccatcaact
tcttcttctccttcggcgccgtctgattcaattcatctttctttaaatagaaaagaggag
attcaaagttcttcccccaacgaagacacccttcaatccctcggtatcacctcgggtgac
ctaatcttctacacgctcgaccccagtcgattttcttcgtctgaatccctgattcccaac
tctcaggaacctatctctagtccgctggtccagaattctgaatttcccctcaggatagac
ctgacccttgattcaggaaaacccctgcaaaaaccctcctcaatggagcccctagatcca
ccaaaaattaccaattcagatcccagttcacaattaaagcaagcccatcaaccagaaagt
gcaaatcttaacgaacaaaatgagggatcaacggattatatggagtttgatggtattgat
gaccaggaggaaggggatgatgcgtctgctctagaggctgttgggaatgggaaatcgttt
tctgtgccgggatttttgaggaaagtgtttacagaagagttgggtggcggtgatgatgat
ggcagccgcaatcataaacttttggtaattgctattcacgctgttttattagaatctggc
tttgttgggtttgatatgaatttgaaaactgaaagtaaggggttccccttcaggaatgat
tggccttccagtggttttaggttgtccctgttttatactcttcctgagattgtcagtgat
gtttcccccggtttagattgccataattgtgttgttggattgaagtttcagaatgtaggg
aagtttatgatggtgtatggatctttaaatgctggttctgccatgcattcggttcggctg
aacgaggatgagttagtgtctttcttgaatgttgtgtgggctaattgtggtttaggggat
gatattatgattagtggagatgtggttttaggggcgtcacccgagaatgaggtgtttaag
ttttggaggaatgtgaaggataatcttgcattgccattgttgattgacttgtgcgagagt
gttggtttagtgctgccgccttgctttatgcgccttcctactgatcttaagcttaaaatt
ctggagtcattgcccggggccgacattgcaaaagtgagctgtgtctcggctgaactgcgt
tatctggcttcaagtgatgacctgtggaagcaaaagtgtgtggaacagtttggtcatgct
tgtaaaacagaggacaaaggcccatggaaggagaagtttgccaggttctgggaaagccga
aagaggaggaagttgggttctagatctttatttcgcagaccacttcatcctcgcaggata
cttgatcctattccaaggtttcctcattggccggggattataggtggagactacgatttg
tatccacaaattcccggtggggcgagattgcgggatctcggccactgttcgaggagtcat
gtaccccgctgtcagtttggacgaaacaggatatga
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