Coffea arabica (coffee): 113731738
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Entry
113731738 CDS
T11342
Name
(RefSeq) probable helicase CHR10 isoform X4
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113731738
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113731738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-GeneID:
113731738
NCBI-ProteinID:
XP_027112945
UniProt:
A0A6P6WD09
LinkDB
All DBs
Position
2e:22636938..22646770
Genome browser
AA seq
879 aa
AA seq
DB search
MNYQQRLMAAAKYVYAGDSPARDDPVVNPVDFGITATLKPHQVEGLSWLIKRYLLGVNVI
LGDEMGLGKTLQAISFLSYLKVHRRSSGPFLVLCPLSVTDSWVSEVANFAPKIRVLCYVG
EKEHRCTLRKKMYEHVKGQLLLSNVPSLAFDMLLTTYDIALIDQDFLSQFPWHYAIIDEA
QRLKNPSSVLYHVLKERFIMLRKLLMTGTPIQNNLTELWALMHFCMPLVFGRLEEFLSAF
KEAGDPSCCNSEIARNQFIKLKYVLGAFMLRRTKSKLIESGNLVLPPLTEITVMAPLVPL
QKKVYVSILRKELPKLLAFASGALNAASLRNIVVQLRKACSHPYLFPGIEPEPYQEGEHL
VQASGKLVILDHILQKLHNSGHRVLLFAQMTKTLDILQDFLEWRKYSYERLDGSVRAEER
FVAIRSFSQQSQKGSSTSKADESSEFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
QALQRAHRIGQKNHVLSINLVTSKTVEEVIMRRAERKLQLSHNVIGDDIVNQEGKEMSGP
EDGDLRSVMLGLHKFDPLEMSNENSNQIDKNELTAMAERVVAFRYKLQSEIDDRKFEVNP
VDMLHGTDILTRGGPESIKYDPDLDEATYCEWVEKFKETSPSNHDSIIEVGNRRGILEDK
HLKAQAARKKAEQKKLSKWEALGYVSLAVVDPVIPTEDNILSDSGSVNFVYGDCTDPSRF
SASESTVIFSCIDNSGNWGHGGLFDALQKLSASIPAAYQRAHEFGDLHLGDLHVVEITKD
SGEVASGSPVRQWVALAVVQSYNPRRKVPRSNISIPDLECCLAKASFFASQNSASIHMPR
IGYQDASDRSEWYTVERLLRKYAAVYGTNIFVYYYRRSG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccagcaaagactgatggcagcggccaagtatgtctacgccggcgactccccc
gccagagatgatccggtggtcaatcccgttgacttcggaatcactgccactctcaaacct
caccaagtagaaggcctctcctggctaattaaacgctaccttctcggcgtcaacgttatt
ctaggggatgagatggggttgggaaagactttacaagcaatatcttttttgagttatttg
aaggttcatcggaggtcttctgggccattcttggtattatgtccactgagtgtgactgat
agctgggtatccgaagtagccaattttgctcccaagataagagtcctctgttatgttgga
gaaaaggaacatagatgtaccttgcgcaagaagatgtatgagcatgtcaaaggccagctt
ttattgtctaatgtaccatcattagcttttgatatgctactgactacatatgacatagca
ttaattgatcaggattttctgtcgcaatttccatggcattatgcaatcattgatgaagca
cagagacttaaaaatccttcaagtgttttgtatcatgtcctcaaagaaaggttcattatg
ctgagaaagttgctgatgactggcactcctatccagaacaatctaactgaactttgggct
ttgatgcacttctgtatgcccttagtatttggaagattggaggagttcctttcagcattc
aaagaagctggagatccttcatgttgcaattcagagatagctcgaaatcagtttattaaa
ctgaaatatgtacttggagcattcatgcttcgaagaaccaaatcaaagcttattgagtct
gggaaccttgtgctgccgcctctcactgagatcactgtgatggcacccttggttcctctg
cagaagaaagtctatgtgtccatattgcgcaaagagcttcctaagctgctggcatttgct
tcaggagccttaaatgctgcttccttgcggaacattgtagttcagctacgcaaggcatgt
agtcatccttacctttttcctggtattgagcctgaaccatatcaagagggtgaacaccta
gttcaggctagcgggaaactcgtaattctagatcatatactgcagaagctgcataattct
ggacatcgtgttcttctttttgctcagatgaccaaaacacttgatatattacaggatttt
ctagaatggaggaaatactcttatgagcgtcttgatggttcagttcgtgccgaggagcgg
tttgtggcaataagaagtttcagccaacaatcccaaaaaggaagctcaacttctaaagca
gatgaaagcagtgaatttgtctttatgatttctactagagctgggggagtcgggctgaat
ctggtggctgctgatactgtcatattttacgaacaagattggaatccccaggtcgacaag
caagctctccaacgtgctcacaggattggtcaaaagaatcatgttttatccataaattta
gtgacatcaaaaacagtagaggaggttattatgcgtcgggcagaacgcaaattgcaactt
agccataatgttataggagatgatattgtcaatcaggaagggaaagagatgtcaggacct
gaagatggtgacttgcggtctgtcatgcttggtttgcataaatttgaccctctagagatg
agcaatgaaaattccaatcaaattgacaaaaatgaattgactgcaatggcagagagggtt
gttgcatttcgctacaagctacaatcagaaatagatgacagaaagtttgaggtcaatcca
gtagatatgttgcatgggacagacattttaactcgaggaggtccagagtccataaagtat
gaccctgacttagatgaggcaacttactgtgagtgggtggaaaagtttaaggaaacatca
ccatcaaaccatgatagtattatagaggtaggaaataggagaggcatactggaggacaag
cacctcaaagcccaggctgctaggaaaaaagcagagcagaagaaattgtccaagtgggaa
gctcttggatatgtttcattagctgttgttgatcctgtgatccctacagaggacaacatt
ttgtcagattctggttctgttaattttgtttatggggattgcacagatccttcacgattt
tctgcatcagaatctacagttatattcagctgcatagataactctggaaattggggtcat
ggtggtctgtttgatgcacttcaaaaactttcagcttccattccggctgcataccaacga
gctcatgagtttggcgatcttcatctgggtgatctgcatgtcgttgaaattacaaaggat
tctggtgaagtagctagtggcagtcctgttcgtcaatgggtagctttagctgttgtacaa
tcatataatcctaggcgtaaggtccctcggagcaatatttctattcctgatttggaatgt
tgtctagctaaagcatcattttttgcatctcaaaattcagcttcaatccatatgccaagg
attggttaccaggacgcatcagatcggtcagaatggtatactgttgaacgtcttctaagg
aaatatgctgctgtatatggaacaaatatttttgtgtactactatcggcgctctggttga
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