Coffea arabica (coffee): 113731948
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Entry
113731948 CDS
T11342
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113731948
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113731948
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113731948
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113731948
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
113731948
Ion channels [BR:
carb04040
]
Chloride channels
Chloride channel (CLC)
113731948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Neurensin
TAT_signal
Motif
Other DBs
NCBI-GeneID:
113731948
NCBI-ProteinID:
XP_027113297
UniProt:
A0A6P6WHS8
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Position
2c:21237001..21246402
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AA seq
816 aa
AA seq
DB search
MEYLRQREREDGGDIENEAGGEGGGEEVVYENYERNEIERKASFFSENQRDHDVFGAGGQ
SANRLLLREPLLKSKSRINTTSQIAIVGANVSPIESLDYEIIENELFKQDWRSRKKVEIY
QYVFLKWTLALLIGLCTGLVGFFNNLAVENIAGFKFLLTNNLMLKHQYFLAFAAYAGCNV
VLAVCAAVLCAFIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKIFGSIFGVAAGFVV
GKEGPMVHTGACIANLLGQGGSRKYHLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAP
VGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGLMIYCGSGKCGLFGKGGLIMFDVS
SAVPAYSTPDVLAVILIGVLGGIFGSLYNFLVDKVLKTYSIINERGPGFKVLLVIFITLL
TSCCSYGLPWFAKCTPCPTGIEEDCPTVGRSGDYKSFQCGPGQYNDLASLLLNTNDDAIR
NLFSSKNIHEFHLSTLVVFFVAVYFLGIVTYGIAVPSGLFIPVILAGASYGRLVGRLVEM
VLGSSSGLGVGLFSVLGAASFLGGTMRMTVSLCVILLELTNGLLMLPLMMLVLLISKTVA
DSFNKGVYDQIVKMKGLPYLEAHAEPYMRQLVAGDVCSGPLITFSGVEKVGNILHALRLT
RHNGFPVIDEPPLSDAPELCGLVLRSHLLVLLKGKNFLKHPVSTGLEILKRFHAFDFAKP
GLGKGLKVEDLEITAEETEMYVDLRPITNTSPYTVVETMSLAKAALLFRELGLRHLCVVP
KKPGRPPIVGILTRHDFMPEHVLGLYPHLTRAHKVM
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaatatctgcgacaacgagaacgagaggatggaggagatatagagaatgaagcagga
ggagaaggaggaggagaggaggtggtgtatgagaattatgagaggaacgagatagagagg
aaggcgtcgtttttttcggagaaccagagagatcatgatgtatttggagctgggggacag
tccgcgaatcgtcttcttcttagggagccgcttctgaagtcgaagagcagaattaacact
acttctcagattgccattgttggtgccaatgtttctcctatcgaaagcctcgattacgag
atcatcgaaaatgaactttttaagcaggattggaggtctaggaagaaggttgagatatat
cagtatgtttttctcaagtggacacttgctcttctcattggattgtgcactggccttgta
ggcttcttcaataatcttgcagtggaaaatattgctggtttcaagttcctacttacaaac
aacctaatgcttaagcatcagtactttttggcatttgcagcatatgctggttgcaatgta
gttctggcagtttgtgctgcagtgctatgtgcattcattgctcctgcagcagctgggtct
ggtatacctgaggtgaaagcctatcttaatggtgtggatgctcattctatactggctcca
agcacgctatttgtgaagatattcggttccatatttggagttgctgctggatttgttgta
ggcaaggaaggacccatggtacacactggtgcttgcattgccaacttgcttggacaggga
ggttcacgcaagtatcatttgacatggaaatggcttagatatttcaaaaatgaccgtgac
cgaagggatttgatcacctgtggagctgctgctggtgttgcagctgctttccgtgctcca
gttggtggcgtcctttttgcccttgaagaagcagcctcatggtggaggagtgctcttctg
tggaggacctttttcacaactgcagtagtcgctgtggtattgaggggtctaatgatttat
tgtgggagtggaaaatgtgggctatttggaaaaggtggtttgatcatgtttgatgttagt
tctgcagtacctgcttatagcaccccagatgtacttgcagttatattgattggagttctt
ggaggcatctttggaagcctctacaactttcttgtggacaaggtgcttaaaacttacagc
atcatcaatgagaggggtccaggtttcaaagttctactcgtcatcttcattactctcctg
acctcttgttgctcttacggcttgccttggtttgcaaagtgcacaccctgtcctactgga
atcgaggaagattgccccacagtaggtcgctctggagactacaaaagtttccaatgtggg
ccaggacagtacaatgatcttgcttcccttctccttaacaccaatgatgatgccatccgt
aatttatttagctcaaaaaatattcacgagtttcacctgtccacacttgttgtcttcttt
gttgctgtatattttcttggtattgttacttatggaattgctgttccctccgggttattc
atccctgtcatacttgctggagcctcatatggacgccttgttggacgccttgtggagatg
gtcctggggtcttcttctggtcttggtgttggcctcttttctgtgcttggagctgcatct
ttccttggtggcacgatgagaatgacagtatcactgtgtgtcatactccttgagctgact
aatggtctgttaatgctgccactgatgatgcttgttctcctaatatcaaaaactgtagct
gatagtttcaataagggtgtttatgaccaaatagtgaagatgaagggtttgccttacttg
gaagctcatgctgaaccatatatgcggcagttggttgcaggagatgtttgttctggcccc
ttgataacattttctggtgttgaaaaagttggtaacattttacatgcactaagattaacg
agacataatggcttcccggtgattgatgagccacctctttccgatgctccagaactatgt
gggctggttttaaggtctcacttgcttgttcttctgaaagggaaaaactttttgaagcat
ccagtatccactggattggaaatattaaagaggtttcatgcgtttgattttgcaaagcca
ggattgggaaagggtcttaaggtagaggatctggaaatcactgcagaggagacggagatg
tacgttgaccttcgcccaataactaatacgtctccatacacagttgtggagacaatgtcc
ctggctaaagctgcacttctatttcgagagcttggtcttagacacctctgtgttgtccca
aagaaacctgggagaccgccaattgttggaatcttaactaggcatgactttatgcctgag
catgtcttggggctctatccacatcttactcgtgcccacaaggtcatgtag
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