Coffea arabica (coffee): 113732009
Help
Entry
113732009 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113732009
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113732009
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113732009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
zf-RING_UBOX
zf-RING_2
zf-RING_Vps41
zf-C3HC4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
113732009
NCBI-ProteinID:
XP_027113390
UniProt:
A0A6P6WE77
LinkDB
All DBs
Position
2e:complement(23377032..23381650)
Genome browser
AA seq
355 aa
AA seq
DB search
MAASEEEVAAELEAVEAVYSQDSYILQNYPPHLHIQVKPRTADVSSQQFVEAIIGIQATS
KYPDEPPIISIVDSKGLDDVRQNQLIASIRDKAIALSSCLMLVALCEEAVEKLSSMNHPD
GDCPLCLNPLLDEKDGNDSLPFMKLMSCFHCFHCECIIRWWNWLQAQKELDHANTSSSVT
SIKDMEDQEGMCEITEERMGECPVCRKVFLAKDIEHVLDLVGTDYHLSSSGTESLDEDNL
LQSYPEKSRRQKYEAILKLQKENDGLIEPKKHEVLLPGMFLPRSAPPSSISLEKETDGQQ
SEDGVVGSGATPSVPSNRPSTSKHRNFSGRKHSHRGRSSGKHARRWIQKENGAAN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcagaagaagaagtggccgcagaattggaagctgtggaagcagtttatagt
caagactcctatattcttcaaaactaccctccccacctccacatccaggttaaaccccgc
actgccgatgtctcttctcaacagtttgtggaagcaattattgggattcaagcaacgtct
aagtatccggatgaaccgccaattattagcattgttgattcaaagggtttagatgatgtg
aggcaaaatcaattaatagctagtataagggacaaggccattgcactctcctcgtgtttg
atgcttgttgcactatgtgaggaagcagtggagaagctctctagtatgaatcatccagat
ggcgattgcccattatgcttgaatccattactcgatgagaaagatggcaatgactcattg
ccatttatgaagttgatgtcctgttttcattgctttcactgtgaatgcatcatcagatgg
tggaactggcttcaagctcaaaaagaattggatcatgcaaatacttctagttctgtcaca
tctatcaaggacatggaagaccaagaaggtatgtgcgaaattactgaagaaaggatggga
gagtgtcctgtttgtcgtaaagtttttcttgcaaaggatattgaacatgtacttgacttg
gtcggaactgactatcatttgagttcgagtggaactgaatccttagacgaggacaatctt
cttcagtcttatccagagaaaagtagaaggcagaaatatgaggccatattgaaacttcag
aaagagaatgatggcttaattgaacccaaaaagcacgaagtactgttgcctggtatgttt
ctacctcggtcggctccaccatcttcaatttccttggagaaagaaaccgatgggcaacaa
agtgaagatggagttgtgggatcaggagcaacaccaagtgttccatcaaataggcctagc
accagcaagcatagaaacttcagtggcaggaagcattcacacagaggacgaagttctgga
aaacatgcaaggcggtggattcagaaagagaatggagctgctaattga
DBGET
integrated database retrieval system
